Gossypium hirsutum (upland cotton): 107950718
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Entry
107950718 CDS
T04793
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107950718
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107950718
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
FAF1
TAP_C
DUF4778
Arg_decarbox_C
Motif
Other DBs
NCBI-GeneID:
107950718
NCBI-ProteinID:
XP_016741128
UniProt:
A0A1U8NSS6
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Position
D03:35352340..35355507
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AA seq
471 aa
AA seq
DB search
MVDVTDKLAYFQATTGLEDPDLCTEILQAHGWDLELAISSFTSSTQPSASSTVSDSDPPD
SRARTDSASASASASASASASASGPITAPAPGLAWRLVTLPISVISGSLGLISGAVGLGL
WAAGGVLSYSLGMIGLGSGQGGESSAGLVSVSAAASEAMDFVAEFEREYGTRGLNFVGEG
FMDALQRSRNAFKLLFVYLHSPDHPDSPVFCERTLCSQALAAFVNENFVAWGGSIRASEG
FKMSNSLKASRFPFCAVVMPATNQRIALLQQVEGPKSPEEMLTILQRVLEESAPVLVAAR
LDAEERRNNMRLREEQDAAYRAALEADQARERQRREEQERLEREAAEAERKRKEEEEARE
RAAREAAEKEAARARMQQEKALSLGDEPEKGPNVTQVLVRFPTGERKERRFHSTALIQAV
YDYVDSLGCLEVEDYNLVSNFPRVTYGTEKRSLTLKEAGLHPQASLFVELN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgtaaccgataaattggcatattttcaagccaccacgggactcgaagatccc
gatttgtgtaccgaaatccttcaggcccatggttgggaccttgaactcgccatctcttcc
ttcacctcttccactcaaccctccgcttcttccactgtctctgattccgaccctcccgat
tcacgggcccggactgattccgcctcggcctctgcctccgcctccgcctccgcctccgcc
tccgcctccggtcctattaccgctcccgcaccgggcttagcctggagactcgttacatta
ccgatttccgtgatatccggaagtttagggttgatctctggcgctgttgggctgggtcta
tgggccgcgggtggagttctttcgtattcccttgggatgatcgggctaggctctgggcag
ggcggggaatcatcggccggattggtatcggtctcagctgcggcttctgaagcgatggat
ttcgtggcggagtttgaaagggagtacggaacgagagggctgaattttgtcggcgagggt
tttatggacgcgttgcagaggtcgaggaacgccttcaagctgttgtttgtgtacttgcac
tcgccggaccacccggattcgcccgtgttctgcgaaaggacgttgtgttcccaggctctg
gcggcctttgtgaatgagaatttcgtagcgtggggcggaagcattagggctagtgaaggt
tttaagatgagtaatagcttgaaagcctccaggttcccgttttgtgcagtcgttatgcct
gctaccaatcagaggatcgcgcttcttcaacaggttgagggacctaaatctcctgaagaa
atgctcacaatactacagagagtgcttgaagaaagtgctcccgttcttgttgctgcaaga
ctagatgcggaagagagaagaaacaacatgcgtttaagggaggagcaagatgctgcttat
agagctgcgcttgaagctgatcaggctagggaacgccagaggagagaggagcaagaacgt
ctggaaagggaagcagcagaagctgagcggaaacgtaaggaagaagaagaggctcgtgaa
agagcagcacgtgaagctgctgaaaaggaagctgcccgagctagaatgcagcaagagaaa
gccttgtcacttggtgatgaacctgagaaaggacctaatgttacacaagttttggtacgt
tttcctactggagaacgcaaagaaaggaggtttcacagtactgcactaatccaagctgtt
tatgattatgttgattcattgggttgcttagaagttgaggattacaaccttgtctccaac
tttcctcgagtaacatatggtacagagaagcgctcactgaccttgaaagaggccggatta
catcctcaggccagcctctttgtggagctaaactag
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