Gossypium hirsutum (upland cotton): 107951276
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Entry
107951276 CDS
T04793
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107951276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107951276
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
107951276
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
107951276
NCBI-ProteinID:
XP_016741759
UniProt:
A0A1U8NUU8
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Position
D09:18684199..18687042
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AA seq
303 aa
AA seq
DB search
MRPPRGRGGGGGFRGRGDGGRGRGGGGRGGDRGGSATKSRGGGRGGRGGGRGGGGRGGMK
GGSKVIVEPHRHEGVFVAKGKEDALVTKNMVPGEAVYNEKRIAVQNEDGTKVEYRVWNPF
RSKLAAAVLGGVDNIWIKPGAKVLYLGAASGTTVSHVSDVVGPNGVVYAVEFSHRSGRDL
VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHF
VISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYRMPKKQK
AAA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagacctccaagaggccgtggtggtggtggtgggtttaggggcagaggtgatggaggg
agagggagaggtggtggtggaagaggtggcgatagagggggcagtgccacgaagtcccga
ggtggtgggcgtggtggccgcggtggaggaagagggggtggaggaagaggtggaatgaaa
ggtgggagcaaggttatagtagagccccatagacacgagggagtttttgttgcaaagggt
aaagaagatgctcttgttactaagaatatggtccctggtgaagctgtctacaatgaaaaa
aggattgctgttcagaatgaagatgggaccaaagttgaatacagggtttggaatcctttc
cgatccaagttggcagctgcggttcttggtggtgtagataatatatggattaaacctggt
gctaaggttctttaccttggagctgcttctggtactactgtttctcatgtatctgacgtt
gttggtcctaatggggtggtttatgctgtggaattttctcaccgaagtggtagagacttg
gtaaacatggctaagaagcggacaaatgttatacctatcattgaagatgccaggcatccg
gctaaatataggatgctagttggcatggtggatgtgatattttctgatgttgctcagcct
gatcaggctaggattttggctttgaatgcatcatatttcctgaaagctggaggtcatttt
gttatttcaattaaggcaaactgcatcgactccactgttcctgctgaggctgtattccag
agtgaggttaagaaattgcaacaggagcaattcaagccttttgagcaagtcacccttgaa
cctttcgagcgcgaccatgcttgtgttgttggtggctaccggatgccgaagaaacagaaa
gcggcagcttaa
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