Gossypium hirsutum (upland cotton): 107951855
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Entry
107951855 CDS
T04793
Name
(RefSeq) katanin p60 ATPase-containing subunit A1 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107951855
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
107951855
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107951855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_22
Mg_chelatase
AAA_14
AAA_16
AAA_28
AAA_33
IstB_IS21
RNA_helicase
PhoH
TsaE
AAA_7
AAA_17
AAA_24
nSTAND3
Parvo_NS1
AAA_18
Motif
Other DBs
NCBI-GeneID:
107951855
NCBI-ProteinID:
XP_016742505
UniProt:
A0A1U8NUI0
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Position
A02:88664537..88669159
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AA seq
520 aa
AA seq
DB search
MVGNSLAGLQEHLKLAREYALEGLYDTSIIFFDGAIAQINKHLTSLDDPLIRAKWMNVKK
ALSEETEVVKQLDAERRSFKEAPNGRRPSSPPIHAKSSFVFQPLDEYPTSSGAPVDDPDV
WSPPSRDTSSRRPARAGQVGTRKSPQDGAWGRGNTRTGTTGRGAKAGGSSRTNTGARAST
TGKKGTGSGKSTKGDSANGDAEDGKSKRSQYEGPDPDLAAMLERDVLETTPGVRWDDVAG
LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV
SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSEL
LVQVDGVNNIGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR
INLKTVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDE
ISKDPVAMCDFEEALAKVQRSVSQADIEKHEKWFTEFGSA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggttggaaattcgctagctggactgcaagagcacttgaaattggctcgagaatacgct
ctcgaaggcctctacgacacttccattatattctttgatggcgccattgctcagatcaac
aagcatctaaccagtcttgatgacccgctaattcgtgcaaaatggatgaatgtaaagaaa
gcactatcagaggagacagaagttgtgaagcaattggatgctgagagaaggtcatttaag
gaagctcctaatgggcggcgtccttcttcgccaccgattcatgctaagtcatctttcgta
ttccaaccactagatgagtatccaacttcatcaggtgccccagtggatgatcctgatgtg
tggagtcctccaagtcgggacacttcaagtagaagacctgctagggctggtcaagtgggc
acgaggaaatctccacaagatggggcttggggtcgtggcaataccagaacaggtacaact
ggacgaggtgcaaaggcaggtggttcaagtagaactaacacaggggccagagcatctacc
actggaaagaagggtactggctcagggaaatctacaaaaggagattcggcaaatggtgat
gctgaagatggaaaatctaagaggtcccagtatgagggacctgatccagatttggcggca
atgctagaaagggatgttttagaaaccacgcctggagtacggtgggatgatgttgctggt
ctgactgaagcaaaaagacttttagaggaggctgttgttcttcctttatggatgcctgaa
tattttcaaggtattaggagaccatggaaaggcgttcttatgtttggacctcctggtact
ggcaaaactcttctagctaaagcagttgccactgaatgtgggacaacatttttcaatgtt
tcttctgctacattagcctcaaagtggcgtggtgagagtgagcgtatggtccggtgcttg
tttgatcttgcaagagcttatgctcctagtacaatttttattgatgagattgactctctt
tgcaatgcccgtggggcttctggggagcatgagtcatctagaagggtaaaatctgaactg
cttgttcaggtagatggtgtaaataatattggtacaaatgaagatggcagccgcaagata
gtgatggttttggctgcaactaacttcccatgggacatagatgaggcactcaggaggcga
ctggaaaagcgaatatatattcctctgcccaattttgagagtcgtaaggagctcattcgg
atcaatctaaaaacagttgaggtggctgctgatgtggatattgatgaagtggctcgtcgt
actgaagggtatagtggggatgatctcacaaatgtttgtcgcgatgcttccttaaatggc
atgaggcggaaaatagctggtaagacacgtgacgagattaagaacatgtccaaagatgag
atttcaaaggatcctgttgctatgtgcgactttgaagaagccttggcaaaggtccagaga
agtgtttcacaagccgatattgagaagcatgaaaaatggtttaccgaatttggatcagca
taa
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