Gossypium hirsutum (upland cotton): 107956009
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Entry
107956009 CDS
T04793
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107956009
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107956009
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Motif
Pfam:
Glyco_hydro_28
PRD1_P5_C
Motif
Other DBs
NCBI-GeneID:
107956009
NCBI-ProteinID:
XP_016747256
UniProt:
A0A1U8P7S3
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Position
D07:11720993..11722667
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AA seq
348 aa
AA seq
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MLILLLLTISSAKAQEAGGGGGGGGGGGGVIDVVAKFGAKADEKTDLSKIAFNRIENFKL
SGAGVFDGQGTTAYKRKGCEKHNFCGSLPINLRFDFLTNAMIQGVTTKDSKQFHINVLGC
KNITFEHFTVLAPGESPNTDGIHIGRSDGVNVLNTKIKTGDDCVSIGDGTKNLVINGVTC
GPGHGISIGSLGLFKNEEPIDGVTVKNCTLTNTSNGVRIKSWPGAEPGTCSNIHFEDITV
TNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSALPEAVKIICSATLPCENV
ELADIEITHSGPTGPAVSQCSNVKPKVSGKQNPAACSAPVPANPTPTS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgttaatactgttacttttaaccatatcatccgctaaagctcaagaggctggtggtggt
ggcggtggaggaggaggaggtggtggcgttattgatgttgttgcaaagtttggtgctaag
gcagacgagaaaacagatttgagtaagattgccttcaatagaattgaaaatttcaaattg
tctggcgcaggagttttcgacggccagggaaccactgcttataaacggaaaggttgcgaa
aagcataatttttgtggttcacttcctattaacctaaggtttgattttttaaccaacgca
atgatacaaggtgtaactaccaaagacagcaagcagttccacattaatgttctaggatgc
aaaaacattactttcgaacatttcaccgtattagcacctggagaaagcccaaacactgat
gggattcacatcgggagatcagatggggtcaatgttcttaacacgaagataaaaactggt
gatgattgtgtttcaattggggatggtaccaaaaatttggttatcaatggagtaacttgt
ggaccaggacatggtatcagtattggcagtctcggattgtttaaaaatgaagaacctatt
gatggagttactgtaaaaaactgcaccttgacaaatacttcaaatggtgttagaatcaaa
agttggccaggtgcagaacccggcacttgttcgaacattcactttgaggatattaccgtg
accaatgtcagttctcctattataattgatcagaaatattgcccatggaacaaatgcaaa
ataaatgaagaatcaaaagttaaactaagcaacattagtttcaaaaacattcacggcact
tctgcgcttccagaagctgtcaagattatttgcagcgctactttgccgtgtgaaaatgtg
gaactcgccgacattgaaattacacacagtggaccgactggacctgcagtatcacaatgt
tcgaatgtgaagcctaaagttagtggcaaacaaaatccagctgcatgttccgcccctgtc
ccagcaaaccctacccctacctcttaa
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