KEGG   Gossypium hirsutum (upland cotton): 107956009
Entry
107956009         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107956009
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107956009
SSDB
Motif
Pfam: Glyco_hydro_28 PRD1_P5_C
Other DBs
NCBI-GeneID: 107956009
NCBI-ProteinID: XP_016747256
UniProt: A0A1U8P7S3
LinkDB
Position
D07:11720993..11722667
AA seq 348 aa
MLILLLLTISSAKAQEAGGGGGGGGGGGGVIDVVAKFGAKADEKTDLSKIAFNRIENFKL
SGAGVFDGQGTTAYKRKGCEKHNFCGSLPINLRFDFLTNAMIQGVTTKDSKQFHINVLGC
KNITFEHFTVLAPGESPNTDGIHIGRSDGVNVLNTKIKTGDDCVSIGDGTKNLVINGVTC
GPGHGISIGSLGLFKNEEPIDGVTVKNCTLTNTSNGVRIKSWPGAEPGTCSNIHFEDITV
TNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSALPEAVKIICSATLPCENV
ELADIEITHSGPTGPAVSQCSNVKPKVSGKQNPAACSAPVPANPTPTS
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgttaatactgttacttttaaccatatcatccgctaaagctcaagaggctggtggtggt
ggcggtggaggaggaggaggtggtggcgttattgatgttgttgcaaagtttggtgctaag
gcagacgagaaaacagatttgagtaagattgccttcaatagaattgaaaatttcaaattg
tctggcgcaggagttttcgacggccagggaaccactgcttataaacggaaaggttgcgaa
aagcataatttttgtggttcacttcctattaacctaaggtttgattttttaaccaacgca
atgatacaaggtgtaactaccaaagacagcaagcagttccacattaatgttctaggatgc
aaaaacattactttcgaacatttcaccgtattagcacctggagaaagcccaaacactgat
gggattcacatcgggagatcagatggggtcaatgttcttaacacgaagataaaaactggt
gatgattgtgtttcaattggggatggtaccaaaaatttggttatcaatggagtaacttgt
ggaccaggacatggtatcagtattggcagtctcggattgtttaaaaatgaagaacctatt
gatggagttactgtaaaaaactgcaccttgacaaatacttcaaatggtgttagaatcaaa
agttggccaggtgcagaacccggcacttgttcgaacattcactttgaggatattaccgtg
accaatgtcagttctcctattataattgatcagaaatattgcccatggaacaaatgcaaa
ataaatgaagaatcaaaagttaaactaagcaacattagtttcaaaaacattcacggcact
tctgcgcttccagaagctgtcaagattatttgcagcgctactttgccgtgtgaaaatgtg
gaactcgccgacattgaaattacacacagtggaccgactggacctgcagtatcacaatgt
tcgaatgtgaagcctaaagttagtggcaaacaaaatccagctgcatgttccgcccctgtc
ccagcaaaccctacccctacctcttaa

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