Gossypium hirsutum (upland cotton): 107959325
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Entry
107959325 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107959325
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Amino_oxidase
NAD_binding_8
PP-binding
Catalase
Hexapep
Pyr_redox_3
DAO
FAD_oxidored
MCRA
Pyr_redox_2
Thi4
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
107959325
NCBI-ProteinID:
XP_040968985
LinkDB
All DBs
Position
A05:6499035..6506793
Genome browser
AA seq
2315 aa
AA seq
DB search
MELAKPIEDQFSKLHPCLPVNTSIGILGAGPSGISAAFALIKLGYNNITLLEKHHTVGGM
CESVDIQGKVYDLGGQVLAANSAPVIFHLAKEIGAELEEMDSHKLALIDSSAGKYQDIKV
ANDYVSMIALTLELQDKAKASSRIGVHAVSDLAADLTPTYLEAHGFKSVPKSVFYGYTAS
GYGYVQDMPYAYIHEFTRTSMAGKIRRFKGGYTSFWEKISKNLPVKVLCNTEVLAIRHND
SADGVSINVKNIKGESEVMEFDKIIISGAFPFKNGKTYRSPASNHTEHETQAMDLNDLEK
ELFSKVMTIDYYTTVLKIKGLEDMPVGFYYFGEYMDDPASIGHPVAMQRFYADSDIFLFW
SYGNSLDIQGSTVCELAIKAVEPMGGQVEQVVLQRRFKYFPHVSSQDMKNGFYERFESEL
QGKRNTYYVGGLMAFELTERNSSYAMALICKHFANNKSTPVFPYVKSLFPFQSYNGNKNI
KQLGELPGVEFPDLCTLDGYLKRWGTHEVTQSKTLYTWINEEGAAVGQRTYAELHANASF
IAQKILTSKKPVIRPGDRVLLVYVPGLDFVDAFFGCLRAKVLPVPVLPPDPLQRGGQALL
KIENISKSCGAVAILSTIVYHSAVRAGLVKQMISLTGKKGKSSANWPNLTWLHTDSWIKN
FKKVIPDATVDPSEPHPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKT
VLISWLPQYHDMGLIGGLFTAMVSGGSAVLFSPMTFIRNPLLWLQTMSKYKATHSAGPNF
AFELVVRRLESDKDKAWNYDLSSLIFLMVAAEPVRQRTLKRFIELTYPFGLSQEVMAPGY
GLAENCVFVSCAFGEGNPILVDWQGRVCCGYTDLDNQDIDIRIVEPETGVELEEGGKEGE
IWISSPSSGIGYWGREEHSHQTFRNELKNHSGRKYTRTGDLGRIVDGKLFITGRIKDLII
VSGRNIYSADVEKTVESSAEVIRPGCCAVIGVPEDVLSEKGIPVPDGADHVGLVVIAEVR
DGKPVKKEVIEQIKTRVAEEHGVSVAAIKLIKPKTISKTTSGKIKRFECLKQFSEGTLNI
VPEPIFSKRTLVRSFTTGTCAEGRTPRQLQSSPVPSTRLRNKDIVEFLKGLVSELTGIPT
NNISAVESLVSYGIDSIGVVRASQKLSDFLGVPIGAVDIFTATCIADLANFSENLLVKSK
PDLTTASSFHAEPDLDSEEPLVEVSIHRQVGIWFLQFVALTFVSILLSLPAYLSVSAFTS
FTLTVHATIDGNQWLACLIYLAFAPLVWILCIALTCMSISFLGNPFLRPNNALIHDVSIW
SVDFVKWWALYKAQQIASKVLAQHLRGTVFLNYWFEMLGARIGPLVTLDTIDITDPSLVS
IGDGAVVSEGALIQSHEVKNGILSFQSIRIGKNSTIGPYAVIQKGSVLAEEAEVLPLQRI
DGGTSVNRSAKANSVQKSTVLSNATPNKTMSQFMGIYLVGFLSSFSAAILYFLYIWLSEK
PHSLQHFAFACISGALHWIPFTVIAYASMFACITVNPASSAVSVAIAYLAHGLILSFLTG
TLTRLLTERQQSKQSYVKIFIRHRITIACHLRFAHLLSGTETFCMYLRLLGAKVGRHCSI
RAINPISDPELVEIGAGVHLGDFSRIITGFYTRGGLIRGKVEVQDNSVVGSQSLVLPGSR
VENDVILGALSVAPENSLLQTGGVYVGSQTPIMVKNTNHALDDRIEEMDMKYKKIVGNLA
ASLAVTTLKVKSRYFHRIGVAGNGYLKIYDKIEGFPDHNIFHPGKSYRVVVRHSNSLSAD
DDARIDARGAAIRIHLDENNDANTSVLDLTLKTGKAFYARTIADFATWLVCGLPAREEHV
KRVPHIRDAVWTSLRHANSYAELHYYSNFVRLLRFSDGEERYVKFKLRPYDGSISEESGK
VEPKGILPPETGAIPRDENDTRPLLFLAQDFQRRVNSGGVRYIFQLQVRPVPSDEAARDV
ALDCTKPWDETEFPYIDVGEINLERNLTAEEAEALEFNPFRRCHVIDVIRASMSSQSASI
DHGRSLIYEICQRLRNKEPLPEAWRIFLEQSDVKVDLSGCPMAAALDKKDTRKVTLERKL
YQTSWSIFVQPLLQTVLPYSLLGLAIFAPLTCVLLMKESEKFPLHWLLPLLWVSSGIVAA
ITCAVAKWVLVGKKNEGETVQIWSKRVFMDTIWQAFRTLVGDYFMEMSSGSIIFLVWMKL
MGSDIEVDQGMYVDSMGALLNPEMVDMEKGGCVGRDALLFGHIYEGEGGKVKFGKIRIGE
GGYIGSRAVAMPGARVESGGNLTALTLAMKEEIVK
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atggagctagcaaaaccaatagaagaccaattctccaagctgcatccatgccttcctgta
aacacaagcattgggattcttggagctggtcctagtggcatatctgctgcttttgcgtta
atcaagcttggttataataatataaccttattggagaagcatcatacagtaggtggaatg
tgtgaatctgttgacatacaaggaaaagtgtatgatttaggtggccaagttcttgctgca
aacagtgcaccagtcatatttcacttggccaaagagattggtgctgaattggaagaaatg
gactcccataagctcgccctcattgacagttctgcggggaagtatcaggatattaaagtc
gccaatgattatgtctctatgatcgccctcacgttagaacttcaggataaggctaaggct
tcaagtcgaattggtgttcatgccgtcagtgacttggctgcagatttgacaccaacctat
cttgaggctcatggatttaaatctgttccaaagtctgtattttatggatacactgcttct
ggttatggatatgttcaagacatgccttatgcttacattcatgagttcaccagaacttca
atggccgggaaaatacgacgttttaaaggtggatacacaagtttttgggagaagatcagt
aaaaatcttccggttaaagtcctttgtaacactgaagttttggcaataaggcataatgat
agtgctgatggtgttagcattaatgtgaaaaacattaaaggagaatccgaagttatggag
ttcgataagattatcatctcgggtgccttccctttcaaaaatgggaaaacatatagatct
cctgcttcaaatcatacagaacatgaaactcaagcaatggatttgaatgatcttgaaaag
gagctcttcagtaaagtaatgacaatcgactactacacaacggtcttgaaaattaaaggg
ctagaagatatgcctgttggtttttattactttggtgaatacatggacgatcctgcatca
atcggacatcctgttgcaatgcagagattctatgctgattccgatattttcttgttctgg
tcatatggtaactccctggatattcaaggatcaactgtctgtgagcttgcaataaaagca
gttgaacccatgggaggacaagtcgagcaagtggttttacaacggcgattcaagtatttc
cctcatgtttctagtcaagatatgaagaatggcttttatgagcgctttgaatctgaactt
caaggaaagaggaatacttactacgttggcggtcttatggcatttgagctcacagagagg
aattcttcatatgcaatggccctaatctgcaagcactttgcaaacaacaaatctacaccg
gtgtttccatatgttaagagtttatttccatttcaatcatacaatgggaataagaatatc
aagcaattaggtgaactccctggagttgaattccctgatctttgtacacttgatggctat
ttgaagcgttggggaactcatgaagtcactcaaagcaaaacgctttatacctggattaat
gaagaaggggcagctgtaggccaaaggacttatgccgaacttcatgctaatgcttctttc
atcgctcaaaagatcttaacaagcaaaaagccggtcatcagacctggtgatagggttctc
ttggtctatgttccaggtctggacttcgttgatgcattttttggatgtttaagagcaaag
gtgttgccggttccagttcttcctccagatcctctgcaaagaggcggacaagcacttctg
aagattgaaaatatatctaaatcatgtggtgcagtggcgatactatcaactattgtctat
cactcagctgttcgtgcaggtttggtgaagcaaatgatctcactgactgggaaaaaggga
aaatcttcagctaactggcctaaccttacttggttgcacaccgattcatggatcaagaac
ttcaagaaagtaattccagatgccacggttgatccgtctgaacctcaccctgatgatcta
tgctttttgcagttcacatctgggtccactggtgatgctaaaggagtcatgatcactcat
ggtgggctcatccataatgtgaagttgatgcgaaagagatacaagagcacctccaagaca
gttttaatcagttggcttcctcagtaccatgacatggggctaattgggggactttttact
gcaatggttagtggtgggtcggcggtactgttttccccaatgacattcatcagaaatccc
cttttgtggcttcaaaccatgagcaagtacaaggctactcacagtgctggacctaatttc
gcattcgagctggtggttcgaagactggagtccgacaaggataaggcttggaactatgac
ctttcttcccttattttcctaatggttgctgctgaaccagtaaggcaaagaactctgaag
agattcattgagctcacttatccatttggcctttcacaagaggtgatggcacctggttat
ggcttggctgaaaactgtgtgtttgtaagctgtgcattcggtgaagggaatcccatcttg
gttgactggcagggaagagtttgctgtggttatactgatctagacaatcaagatattgac
atcagaatagttgaaccagagactggtgtagagcttgaagaaggtggaaaagaaggagag
atttggatcagtagtccaagttctggcattgggtattggggtagagaagaacatagccat
caaactttcagaaacgagcttaagaatcactccggaagaaaatacacaagaactggcgac
ttgggacggatcgttgatgggaaattgttcatcactggaagaatcaaggatctgataatt
gtatcaggaaggaatatatactcagctgatgtagaaaagacagttgaaagctcagccgaa
gttatacgacctggctgttgtgctgtcattggtgttccagaggatgtactgtcagaaaaa
ggaattccagttccagatggtgctgaccatgttggcctcgttgtaattgcagaagttaga
gatggaaagccagtgaaaaaggaagttattgaacagattaaaacccgagttgcagaagaa
catggcgtcagcgttgctgccatcaaactgatcaagcccaagactatcagcaaaacaaca
tcaggaaaaatcaagagatttgagtgcctcaaacaattcagtgagggaaccttgaacata
gtcccggaaccaatcttttcaaagagaactttggttcggtcattcactactgggacttgt
gcagaaggaagaacacctcgtcagcttcagagttctcctgtacctagtacaagactgaga
aacaaggacattgtggagtttctgaaaggcctggtctctgagctaaccgggattcccacc
aacaatatttctgctgtggagagccttgtctcgtatggaatcgattcaatcggagttgtc
agagcatctcagaagctttcagattttctaggcgtgccaattggagcagtagatatcttc
accgcaacctgcattgcagacttggccaacttctcagagaatctcttagtaaaatctaaa
cctgatcttacaacggcttcttcatttcatgctgaacctgatcttgattcagaggagcca
ttggtggaagtatccatacatcgccaagtaggcatctggtttttacaatttgtggctctt
accttcgtgtccatattgttgagtctgcctgcgtatttatcagtttctgcgttcacatct
ttcaccttaacagtccatgcaactatagatggaaaccagtggctggcttgtttgatatat
ttggcctttgcaccacttgtttggatcctctgcatagctttaacttgcatgagtatttct
tttcttggaaatcctttcctgagaccgaacaatgcccttatccatgacgtttccatctgg
tcagttgattttgttaagtggtgggcactttacaaagcccaacaaatagcctcgaaagtt
cttgcacagcatctgagaggaacagtgttcttaaattattggtttgagatgcttggagca
agaatcgggccattggttacactagataccatagacattacggatccatctttagtttcg
attggagatggagctgtggtttcagaaggggcattaattcaaagtcatgaggtaaagaat
gggatactaagtttccagtccattagaattggcaagaattcaacaattggaccatatgca
gtgatccaaaagggaagtgtattggcagaagaagctgaagtactgccattacagaggatt
gatggaggcacttcagtaaatagatcagccaaggctaacagtgtccaaaaaagtacagtg
ttgtcaaatgctactccaaataagaccatgtctcagttcatgggcatctacttggttggt
ttcctcagcagtttctctgcagctattctctacttcctatacatttggctctctgagaaa
cctcattctcttcaacactttgcatttgcatgcatatccggagccttacattggattcct
ttcacagttattgcatatgcttccatgtttgcttgcatcactgtgaatccagcaagttct
gccgtctcagttgccattgcttaccttgctcatggcttgatactcagtttccttacaggc
actttgactcgtcttcttactgagagacaacagtcaaagcaatcttatgtcaagatattc
atcagacaccgaattaccattgcttgccaccttagatttgctcatcttctctctggaaca
gaaactttttgcatgtatttacggcttttgggtgcaaaagttggccgacattgttcaatc
agagctatcaacccaatttcagatccagagctagtagaaattggcgccggcgttcatctc
ggtgacttcagcagaatcattacaggattttatacccgtgggggtttaattcgtgggaaa
gttgaggttcaagataactcagttgttgggagtcaaagcctggtccttccagggtccagg
gttgaaaatgatgtcattcttggtgcactttcagtggctcctgaaaactcacttctccaa
acgggtggtgtttatgttggatcccagactccaatcatggtcaagaacactaatcatgct
ttagatgatcgaatcgaagaaatggacatgaaatacaagaaaatagtgggaaaccttgcg
gcaagtctagctgttaccactttgaaggttaaatcaagatattttcatcgaattggtgtt
gcagggaatggctacttgaaaatatacgacaagattgaagggtttccggatcacaatatt
ttccaccctggaaagtcctaccgtgtggtagttcgacatagcaacagcctgagtgctgat
gatgatgcaaggattgatgctcgaggtgctgctataagaatacatttagatgagaacaat
gatgccaacacttcagtccttgacttaacactgaaaacgggtaaggcattctatgctcgc
accattgctgatttcgcaacatggcttgtgtgtggacttcctgcaagagaagagcatgtg
aagcgagtcccgcatatacgagacgcggtgtggacgtcccttcgccatgctaactcgtat
gcagagctgcattactactcgaacttcgttcgacttcttcggttctcagatggggaagaa
aggtacgtgaaattcaagttgagaccgtatgacggaagtatcagtgaggagtccgggaag
gttgaacccaaagggattctcccaccagaaacaggtgcaattccaagggatgaaaacgac
acccgccccttgcttttccttgctcaagatttccaacgacgggtgaactccggtggtgtt
cgatacatcttccaactgcaagtccggcctgttccgtcggacgaagccgcacgcgacgtt
gcactcgactgcactaaaccatgggatgagactgagtttccatacatcgatgtaggcgag
attaatcttgaacgaaatctcaccgctgaagaagctgaagcacttgagtttaatccattc
cgtagatgccatgtgatcgatgttatccgagcttccatgtcctctcagagtgcttctatt
gatcatgggcggtccctcatctacgagatttgccagcgtttgcgaaacaaggaaccactt
cccgaggcatggaggatcttcctagagcaatctgatgtaaaagtagacctttcaggttgt
ccaatggcagcagcattggataaaaaagacacgaggaaagtgaccctagaaagaaagttg
taccaaacctcatggtcaattttcgttcaaccattattgcagactgtgcttccttattcc
ctcctgggattagcaatctttgcaccattaacttgtgttcttctcatgaaggaatcagag
aaattcccactccattggttgcttcctttgctttgggtttcttcaggaattgtagcagca
ataacatgtgcagtggcaaaatgggtcctcgtaggaaagaagaatgaaggtgaaacagta
cagatatggagtaaaagggtgttcatggacaccatctggcaagcttttagaacacttgtt
ggggactatttcatggaaatgagcagtgggtccattatattcctggtgtggatgaaatta
atgggctcagatattgaagtagaccagggaatgtacgtagatagcatgggagcattatta
aaccctgaaatggtggatatggagaaaggaggatgtgtaggaagagatgcattgctattt
ggacacatatatgaaggtgaaggtgggaaagtgaagtttgggaagatcagaattggggaa
ggagggtatataggaagtagagcagtggcgatgccaggggcaagagtggagagtggagga
aatctcacagctctcacccttgccatgaaagaagagattgttaagtaa
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integrated database retrieval system
