Gossypium hirsutum (upland cotton): 107962191
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Entry
107962191 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107962191
KO
K15199
general transcription factor 3C polypeptide 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107962191
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
107962191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-block_TFIIIC
DUF6581
MarR
HTH_micro
MarR_2
Motif
Other DBs
NCBI-GeneID:
107962191
NCBI-ProteinID:
XP_016753982
UniProt:
A0A1U8PS31
LinkDB
All DBs
Position
A05:complement(109879936..109893731)
Genome browser
AA seq
1844 aa
AA seq
DB search
MDSIITSALEEICFHGQLGISLSSLCTNLDIPPPLKASLWKNLLSIPGLRFMPRNAAFLS
PTDASIQCAEGAEKLDIIILAHETLRNNFVGLYDENVQISSQQRRTLERLAVARTNGVTQ
SQLAKEFGIEGKNFFYILKNLECRGLIVKQPALVRKKEHCSEGDSKISSSVTTNLIYLHR
YAKRLGSQQKFEINKEEQTVETLAYGEENASDDYGFATENGKENISVTDYLPAMKVVCDK
LEEANGKVLVVSDIKRDLGYTRSRGHKAWRNIYRRLKDAGLVEDLHAVVNEKVEFCLRLV
KSFPEKNFEPKLLRCDANLDKGQQLKFGKSILDVDQIVELPIDNQIYDMVDAEGSEGLPV
MTVCERLGIDKKRSYSRFFNMFSRFGMHLQAESHKKTTAYRVWTSGNSCKSSNAFLIKSK
NADDEKQISNLDVGHSGVPDELNQNLLEYNPSASASDSFTPLKVNDLENGTEISCGSPGE
TNHIVLYSDNTQGLPTEQSNTACEAELDLVSTESQICAAPPQPIGLDLLRPPDSGSYQTY
SSQVLTADGARREQRMLGRLQDEKFILRPELYRWLVELEKDKSTKLDRKTVDRMLKKLQQ
QGHCKCMHINVPVVTNCGRSRITQVVLHPSVEALHPELLSEIHDRLRSFEMQVRGHATSK
LKSNDSIPVLDGVQRTPNHVDLEAKAAKSEAMRANGFVLAKMVRLKLLHRFFWGFLSSFH
GWNDVLSLERYLHGQKNLHGSCILFSLEAAIKAIPLELFVQVVGTTLKFDDMIEKCKRGL
CLSDLPIDEYRLLMDTQATGRLSLLIDILRRLKLIRLVPDECSDNRLKAPHAILTHAMEL
KPYIEEPLSLVATSTSSSLDLRPRIRHDFIFSNGEAVDDYWKTLEYCYAAADSRAALHAF
PGSAVHEVFLNRSWASVRVMTSDQRSELLKRIVKDNLNEKLSYRDCEKIAKDLNLTLEQV
LRVYYDKRQKRLNRFRGVPNSNGEQYQGERDKQSSSRKRKRSTVKSIEGIKADARIIQLG
EKEGGTLSDGNDELKEDYHLASSVGPDAIQAYQEADLVEAVNKPGSHEEDEAHYSLIIQN
SFLKMKPTRRKRILWTDEADRELVTQYARYRAALGAKFHRVDWTSLDGLPAPPRACARRM
TNLNRSAKFRKALMQLCNVLSERYKMHIEKSQNRSSNNSDCRLLRFSSIEHGMEYGEDAG
FEKERWDDFDDRKIKSALVDVLHFKQIGKLEASRKKQQGSEMVLATTQDGNFGIPGAEQH
KGSNQSSQHHRFHQKLVKLWNIGNGVGRQVHESLAVSNAVELFKLVFLSISIVPPSPNLL
TETLRRYSEHDLFAAFSYLRDRKIMIGGTCGQPFVLSQQFLHSISKSPFPCHTGKRAANF
SAWIHEREKDLMEGGINLTADLQCGDIFHLFSLVFSGELSVSPCLPDEGVGEAEDLRSLK
RRAEDNELCDVDKAKKLKSIAEGEFVSRREKGFPGIMVSVYSSTFPAANSLELFKDEETF
NPELLNEESSTNLDHMKEMIEFRNSVTTASKSAGSPWEAMAGYTEHLLAKPSDEGQGSHF
DSEIIKVVCTEIQKAGDQGLSIEDVYSLVKMPGEKTPEIIIDTLQAFGIAKKVNAYDSVR
VVDALYHSKYFLASVSSFHRDLKTPLLLTSQAKDGGNSVQQDNKSPDAAKLLGSSSVSDV
HKVTILNLPEEHALPSNEVPTSNANEICMYGKEVLSQGDDEDMICKPFSGERLVPILPWL
NADGTINRMVYNGLIRRVLGTVMQNPGIVEEDIVCQMDVLNPQSCRKLLELMILDRHLIV
KKMLQTTGSGPPALLATLVRSSCRKSKMVCREHFFANPTSTFFL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggattccatcatcacctcagctctggaagaaatatgcttccacgggcagctaggcatt
tctctttcctctctctgcaccaatctcgacatccctcctcctctcaaagcctccctttgg
aaaaatctcctctccatccccggtcttcggttcatgccgcgaaacgctgcgtttcttagc
cctaccgatgcctccattcaatgcgctgaaggtgccgagaaactcgatatcataatctta
gcccatgaaacgcttagaaataacttcgttggcctttatgatgaaaatgttcaaatctca
tctcaacaacgtcgcactctggaaagactcgctgttgctagaacaaatggagtgacacaa
agtcagcttgcaaaggaatttggtattgaagggaagaacttcttttatatattaaaaaac
cttgaatgtagagggttgattgtgaaacaaccggcacttgttaggaagaaagaacattgc
agtgaaggggactccaaaatcagttcatctgtgaccaccaatttgatatacttgcataga
tacgcgaagcgtttgggctctcaacagaagtttgagattaataaagaagaacaaactgtt
gaaacccttgcatacggtgaagaaaatgcttcagatgactatggatttgctacagaaaat
gggaaagaaaatatttctgtgactgattatctacctgcaatgaaagttgtttgtgataaa
ctggaagaagccaatggaaaggttcttgttgtctcagatattaaacgagacttaggttat
acaagatccagaggccacaaagcctggagaaatatctaccgcaggttaaaagatgctggt
ctcgtcgaggatttgcatgctgttgtgaatgagaaggttgaattttgcctaaggttggtg
aagagctttcctgaaaagaattttgagccaaaacttctcaggtgtgatgctaatcttgac
aaaggacaacagctgaagtttggaaagtcaattctggatgtagaccagattgtagagctt
cccattgataatcaaatttatgatatggtcgatgctgaaggatctgagggtttaccggtt
atgacggtatgtgagaggcttggaattgacaagaaaagaagctattctcgattctttaac
atgttctctaggtttgggatgcacctgcaagctgaaagccacaaaaagactacagcttat
cgagtttggacatctgggaattcttgtaaatcatcaaatgcatttttgattaaatcaaaa
aatgctgatgatgaaaagcagatctctaatcttgatgttggccattcaggagttcctgat
gaactgaaccaaaatcttctagagtataatccttcagcttctgcaagtgattcttttact
cccctgaaagtgaatgatttggaaaatggtactgaaatttcctgtggctcccctggagaa
actaaccatattgttctgtattctgacaacacacaagggcttccaactgaacaaagtaat
actgcctgtgaagcagaacttgatttagttagtactgaaagccaaatatgtgctgctcca
ccacagcctataggacttgatttgttgaggcctcctgattctggctcatatcagacctat
tcaagtcaagttctgactgctgatggtgctcgaagggagcaaaggatgcttggacgttta
caggatgagaagtttattttaagacctgaattgtatcgatggcttgtggaacttgagaag
gacaagagcacaaaattggacaggaagactgttgatcgaatgttaaagaagcttcagcaa
caagggcactgcaaatgcatgcacattaatgtgcctgttgtaactaattgtggccgaagc
cgtattactcaggtggttctgcacccgtctgttgaagcattacatccggagctgctgagt
gaaattcatgacaggttgagatcatttgaaatgcaagtccgtggccatgcaacatcgaag
ttgaaaagcaatgattcaattcctgtattagatggtgtccagagaactccaaaccatgtt
gatttagaagccaaggctgctaaatcagaagccatgcgtgccaatggttttgtgctggca
aaaatggtacgcttgaaactgcttcataggtttttttggggtttcttgagtagttttcat
ggttggaatgatgttttatcacttgagagatacctgcatggtcagaaaaatcttcatggt
tcatgcattttattttcattggaagcagccatcaaggccattccacttgaacttttcgta
caagttgtgggaactactctaaagtttgatgatatgattgagaagtgtaagagaggcttg
tgtctttctgatcttcccattgatgagtataggcttctaatggatactcaggcaactggc
agactttcactgctcattgacatcctaaggcgtttgaagttgattcggctggtacctgat
gaatgttcagataacagattaaaggcaccacatgccattttgacccatgctatggagctt
aaaccttacatagaggaaccactatcactggttgccacatctacttctagttctcttgac
cttcgtcctagaatcaggcatgatttcatcttttctaatggggaagctgttgatgactat
tggaaaactttggaatattgttatgcagctgctgattcaagagctgctttgcatgcattc
cctgggtctgctgttcacgaggttttccttaatcgatcatgggcttcggttcgagttatg
acgtctgatcagcgttctgagctccttaagcgaatcgtgaaggataatttaaatgaaaaa
ctttcatatagagactgtgaaaagattgcaaaggatcttaatctgaccttggaacaggta
cttcgtgtatattatgataagcggcaaaagcgtcttaatagatttcggggtgttccaaat
agcaatggagagcagtatcaaggagaaagagataaacagtcatcttctcggaaaagaaag
agatcaactgtcaaatcaatagaaggaataaaagctgatgcaagaatcatacaattaggt
gaaaaggagggtggtacactatctgatggaaatgatgagctaaaagaagattatcattta
gcttcttcagtgggacctgatgccatccaagcatatcaggaagctgatcttgttgaagct
gtgaataagccagggtcacatgaagaagatgaggcgcattattccttaattatccagaat
tccttcttgaaaatgaagccaacacgtagaaaaagaatcttatggacagatgaggcagac
agggaattggtaacccaatatgcaagataccgtgctgcccttggggcaaaatttcaccgt
gtagattggacttcacttgatggcctacctgcgcctcctagagcttgtgcaagaagaatg
acaaacctaaatcgaagtgcaaaatttaggaaagcattaatgcaactatgcaatgtgctt
agtgaacggtataagatgcatattgaaaaaagccaaaataggtcatccaacaatagtgat
tgcagacttctccgattttcatcaattgaacatggaatggaatatggtgaagatgcaggc
ttcgagaaagaaagatgggatgattttgatgacagaaagataaaaagtgctttggtggat
gttcttcattttaaacagattggtaaactggaggcctctagaaagaagcaacaaggatct
gaaatggttctggcaactacccaagatggaaattttggaattcctggtgctgagcaacat
aagggctctaatcaaagctcacaacaccatcgctttcatcaaaagttagttaagctatgg
aatataggaaatggtgttggcagacaagtacacgaatcgttggctgtttctaatgcggtt
gaactatttaagcttgttttcttgagcatatccatagtgccaccatctccaaatttgctg
acagaaactttgcgccgttattcagaacatgatctttttgcagcttttagctatcttaga
gatagaaaaattatgattggtggtacttgcggtcaaccttttgtgctttctcaacagttc
ttgcacagtatttccaagtctccatttccttgccatacaggaaagagagctgctaatttt
tctgcttggattcatgaaagagaaaaagatctaatggaaggggggattaatcttactgca
gatttgcaatgtggtgatattttccacttgttttctcttgttttttctggtgagctttct
gtttccccttgcttaccagatgaaggtgttggagaagctgaagacctaagaagcttaaaa
cgtagagctgaggataatgaattatgtgatgtagataaggctaagaaattaaaatccatt
gcagaaggtgaatttgtttcacgacgagaaaagggctttcctggtatcatggtatcggtg
tatagctcaacatttcctgcagccaattctttagaattgttcaaggatgaggaaacattc
aaccctgagcttttgaatgaggaaagttcaactaatttggaccatatgaaggaaatgatt
gagtttagaaatagtgtcactacggcttcaaagtcggctgggtcaccctgggaagctatg
gctggttacactgagcatctgttggcaaaaccttctgatgaagggcaaggcagtcacttt
gattctgagatcatcaaggttgtttgcactgaaattcagaaggctggtgaccaaggtttg
agcatagaagatgtttatagtcttgtcaaaatgccaggagaaaagacacctgaaatcatc
attgatactctccaagcatttggaatagctaaaaaggtcaatgcatatgactctgttcgt
gttgttgatgctttatatcactcgaaatattttcttgcctcagtttcaagtttccatcga
gatcttaaaacacctttgttgctaacatcccaagccaaggatggtggcaactctgtccag
caagacaataagagtcctgatgctgctaagttattgggcagctcaagtgttagtgatgtg
cacaaagttactattcttaatcttcctgaagagcatgctttaccttccaatgaagttcct
actagcaatgcaaatgaaatctgcatgtatggaaaagaagttttatcacaaggggatgat
gaggatatgatttgtaagcctttttcaggtgagagattggttcctatattgccatggtta
aatgcagatgggaccatcaacaggatggtctacaatggacttatacgacgtgttcttggt
actgtgatgcaaaatcctgggatagtggaggaggacattgtctgccaaatggatgtacta
aatccccagagttgtagaaagctactggaattgatgatattggatagacacctgatagtg
aaaaagatgcttcaaacaacaggtagcggtcctcctgcccttctggcaacccttgtccgg
agtagctgtagaaaatcaaagatggtgtgccgtgaacatttctttgcaaaccctacgagt
acatttttcctgtag
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