Gossypium hirsutum (upland cotton): 121203125
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Entry
121203125 CDS
T04793
Name
(RefSeq) protein TIME FOR COFFEE-like isoform X1
Organism
ghi
Gossypium hirsutum (upland cotton)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF713
Motif
Other DBs
NCBI-GeneID:
121203125
NCBI-ProteinID:
XP_040933158
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Position
A09:82310728..82317617
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AA seq
1625 aa
AA seq
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MDRTREARRVSMASAATTNGLSRRRHRTSSLRDSPEEDGPVETHETARLRDRKKDRDRER
ERYRERERDRLSRTSKRRRGDRLMSNRGDGGDGTSEESVNDDEDDDDEDSGGTGGVGSVR
TVSPNIIAGSLSMSNHHHHNHHHHQLQQHQQHQHRKSFPPPVKVIRTTPSAGMTASMTTS
TSTWKPADEMIGVSVPRKARSGRATKRSHEWASSGGGGVGVLGGEQIHRQASTSPVRTGV
TGALTSPSPAPASPSSSSASMRKKMKPNANGTKQRPPKSSSKSSSSAQEEIEIEIAEVLY
GMMRQPQVPSKQEIIGNDSAKFDSREVNKPNNDSKSVVSSPISISPSTLPQSSSILPSYS
SSSATPMSAIAPKRKRPRPVKYEDENTTTTTPPPPIFPPRHSSISSTTTKVEIDQPAKVE
ATSPNLEKNSGPVAENDSGACDLMSSSKAGPVSSELVQAEPVKEEKNNLALDSKPSTEES
ESRDIGIGNKEESQSPKKESLSSPADNPSSAGLPLDDEREKSTVTKANSTVCENESQREE
KFQIDLMAPPPSRSSPEREGETDVGASDPKPVAADVELEMKSLVNEDDKRMKIGKGDVNV
EVEDNNKKAQPSAEEADSQKPVVNKERNLDLQLDLEKSDRDSGSGSVSGNKLNHHVQKLH
HQHPSVEKTAHSGSLPLPMSIASWPGGLPPMGRYMAPLQGVVSMEGSAVSSAAIQPPHLL
FSQPRPKRCATHCYIARNIHKHQQMMKMNAFWPAAPGSASLYGPKACNLNVVPPSELHGN
IPGRGVNSVQEKGQGLAIFPGHVCKDKSSTAANNMVDAAQRKQIMLQQALPPGAPNNIMQ
GPAFIFPLNQQAAAASVRPGYVKSPPAACSTAASSTSNSALLSATPAGATAAPAFSFNYP
NITGNETQYLAILQNNPYPFPIPAHVGAPPAYRGNHAQPMPFIHGSFYSSSQMLHPSQLQ
QQQQQQPPTQFQQSQQGHQNTSMSSGSSSSQKNLQNQQQRSHGGDVSSGSGNSQVFHASK
KDSPHPLQLWQQQQQPSQNDSHQPRQLDGESDGKDGPSTATDSRVSRSNMNIYGQNFAMP
VQPSNFALMTAASMNSGGNYGEKKQQTQQQSQQLGSKAGVEPLASQAFAMSFSSANGTTA
PGLGISSLAPNHAILQSHPGSTRQGYQHIMAAQQKKDNYHAYEEGKRGTHDASNVQEEKK
AGKSSGTAGQSIAFSRPNMPDSSDSTLAGKDVIDSSICTLGSAPARTSGPVMPASIVSVN
VANAQQQLQRNQQQQLQFGTASAPRSKTPATSNGSAYPDHFHSSSIAAKFSNVLSAYPQN
LIQSSSSPAQSPQWKNSVRTTSSQVPSQSLPSTSSLKNISQQQGRPQQSPTQISFAANPK
SPQGQQPLSSTPSPSPMMVGSPTTSLSRSAGGSPRTTGSSSTSNKGGQASGLSSQQAKNS
PTVPSQKSSPIGGSNVPSVLGNPHISSSSNMGAKPQVALQHQQHQKHSLHQGQLFFPNAY
MQAQAQHSPSSTTPATTASAYYVQRQQQTLPLGSSTTSSTSMLSLCSPVTLANSGTTDPA
KAVAAAVASNMKGGLASQGLINPAQFASPQSTGKSHQLVPGFPCVHAVPSAVQVKPAEQK
QPAGE
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaccagagaagcgaggagagtcagtatggcgtccgccgccacgaccaatggc
ctttcacggcggcgtcataggactagctctctcagagactccccagaggaagacggaccg
gtggagacgcatgaaacggcgcgtttaagggatcgaaagaaggacagagatagggaacga
gaaagatatagagaaagggaaagagatcggttgagtagaaccagtaagagaagaagaggc
gatagattgatgagtaatagaggagatggaggtgatggtacttctgaagaaagcgtaaac
gatgatgaagatgacgacgacgaagacagcggcggaaccggcggtgttggctctgttcgg
acggtttcgccgaacatcatcgctgggtctttgtcgatgtctaatcatcatcaccataac
catcatcaccaccagctgcagcaacatcagcagcatcaacatcgaaagagttttccaccg
ccggtgaaagttattagaacaacaccatcggcggggatgactgccagtatgacaacgagt
acgtctacatggaaaccggccgatgaaatgattggtgtatcggtgcctagaaaagctcgg
tcaggtagagctactaaaaggtctcatgaatgggcatcaagcggcggcggcggcgttggt
gttttaggcggtgaacaaattcaccgtcaagcttcaacttcgccggtaaggacaggtgta
accggggcgttgacgtcaccatctcctgctccggcctctccatcttcttccagtgcttct
atgaggaagaagatgaagcctaatgctaacggaacaaagcaaaggccaccgaagtcgtcg
tcgaaatcttcgtcttcagctcaggaggagattgagatcgagattgctgaggttttatat
ggtatgatgagacagccacaagtcccatctaagcaagaaataatcgggaacgattcggcc
aaatttgattcaagagaagttaataaacccaataatgactctaaatcagtcgtctcttcg
ccgatctccatctccccatcaactcttcctcaatcatcctctattttgccttcatattct
agctcctctgctactcctatgtctgcaattgctccaaagaggaaaagaccaagaccggtg
aagtatgaggatgagaatacgactacaacgacacctccacctcctattttccctcctaga
catagttccatttcatctactacaactaaggttgaaattgatcaaccagctaaagttgaa
gcaacttctcccaatttggagaaaaattcaggacccgtggctgaaaatgatagcggtgct
tgcgatttgatgagttcttcaaaagctggaccagtttcatcagagttggttcaagcggaa
ccagtgaaagaagagaagaataatttggcactggattctaagccttcgactgaagaatct
gagagtagagatatcggtatcggtaataaagaagagtctcaatcgccaaagaaggaatct
ttatcatctcctgctgataatccttcttccgctggtctgccattggatgacgagcgtgag
aaatcgacagtgacaaaagcgaattcaacagtttgtgagaatgagagtcagcgggaagag
aagttccagatagatctgatggcacctcctccatctagatcatctccagaaagggaaggt
gagactgatgttggggcttcagatcctaagccagtggccgcagatgtggaattggagatg
aagtctttggtgaatgaagatgacaaaagaatgaaaattgggaagggagatgtgaatgtg
gaagttgaggataacaataagaaggcccaacctagtgctgaagaagctgattcgcagaag
cctgttgtaaataaagaaaggaatcttgatctccagcttgatttggagaaatctgacaga
gatagtggttcaggtagtgttagtgggaacaagctcaaccaccatgttcaaaagctacat
catcaacatcctagtgtagagaaaactgcacattctggttctttacctttgccgatgtca
attgctagctggcctggtggacttcctccaatgggcagatacatggctcctctacaaggt
gttgtatccatggaggggagcgctgtgtcttcagctgctatccagcctccacatttgctt
ttttctcaaccgaggccaaagagatgtgcaacccattgctacattgcacggaatattcac
aagcaccagcaaatgatgaagatgaatgctttctggccggcagcacctggttcagcttca
ctgtatggcccaaaggcttgtaatctaaatgttgtaccgccttcagaattgcatggaaac
attcctgggagaggggtgaattctgtgcaagagaaggggcagggtcttgcaatttttcct
ggtcatgtgtgcaaagataaaagttctacggctgctaacaacatggtggatgccgcacag
agaaagcaaataatgctccagcaagctctacccccaggagcacccaataatatcatgcaa
ggccctgcttttattttcccattgaaccagcaggctgctgcagcatctgtccgacctggg
tatgtgaaatctcctcctgctgcttgtagcacagctgcatcgagtacatctaactctgcc
ttactaagtgccaccccagctggtgcaactgcagccccggcatttagcttcaactaccca
aatatcacaggcaatgaaactcaatacttggcaattctgcagaataatccctatccattt
ccaattcctgcacatgttggggcgccacctgcttatcgtgggaatcatgctcaacctatg
ccttttattcatggatctttctattcttcctctcaaatgcttcacccttcacagcttcaa
caacagcagcagcaacagccacccacacagtttcaacaaagccaacaaggtcatcagaac
actagcatgtccagtggttcatcctcctcccagaagaatttgcagaaccagcagcagagg
tcacatggaggtgatgtcagtagtggcagtggaaactctcaagtgtttcatgcctctaaa
aaggattcacctcatcccttacaactatggcaacagcagcaacagccgagtcagaatgat
tctcatcaacctaggcaacttgatggtgaatcagatggcaaagatggcccatcaactgct
actgatagcagagtatctcgttcaaatatgaatatctatggtcagaattttgctatgcct
gtacagccttcaaactttgctttgatgaccgctgcttcaatgaattctggtggtaattat
ggggaaaagaagcaacagacacagcagcagtcacaacagctaggctcaaaggctggagtc
gagcctcttgcatctcaagcttttgcaatgtcattttcatctgctaatggtactactgct
cctggccttggtatttcttccctagcaccgaatcatgcaattcttcagagccatccagga
agtacaaggcaaggctatcagcatattatggctgctcaacagaagaaggataattatcat
gcttatgaagaagggaagcgtggaactcatgatgcatccaatgtgcaagaagaaaagaag
gcaggaaaaagttcaggcaccgctgggcagtccattgccttctccaggccaaatatgcct
gattcaagtgattccactcttgcaggcaaagatgtcatcgatagttctatctgtacgctt
ggctctgctcctgctcgaacttcagggcctgttatgcccgcttcaatcgttagtgttaat
gttgctaatgcgcagcagcaacttcagcggaatcaacagcagcagctccaattcgggact
gcttctgctcctcggagtaagacaccagcaacaagtaatggaagtgcttaccctgatcac
tttcactcttcatctatagctgccaagttttcgaatgtgctgtctgcatatcctcaaaat
ctaatacaaagcagcagcagtcctgctcagtctcctcaatggaagaattctgtgaggaca
actagctctcaagttccttctcaatctctaccatcaacttcatccctcaagaatatttcc
cagcaacaaggtcggccacagcaaagccccacacagatttcttttgctgctaatcctaaa
tcaccacaaggtcaacagcctcttagtagcactccttccccttctccaatgatggttggc
tctcccacaacttcgctctccaggagtgctggtggtagcccaaggacaacaggttcctct
tccaccagcaacaaaggtggccaagcatctggtttatcatcccaacaagctaagaactca
ccgactgtgcctagtcagaagtcatctcctattggtgggagtaatgtgccatctgtcctg
ggaaaccctcacataagttcatcttcaaatatgggagccaagcctcaagtggcactacag
catcagcaacatcaaaagcattcacttcatcaagggcagctgttcttcccaaatgcttac
atgcaggctcaagctcaacattcaccaagttcgacaacacctgcaacaacagcaagtgca
tattatgttcaaagacaacagcagactctacctctgggttcatcaacaacttcatcaact
tcgatgttatcgttgtgttctccggttactcttgccaacagcggcaccaccgaccctgca
aaagctgtagcagctgctgtggcaagcaacatgaaaggtgggttggcatcccagggactt
atcaatcctgcacaatttgcttctccacaatccactggaaagtcacatcagctggtacca
ggcttcccatgtgttcatgctgtcccttcggctgttcaggtaaaaccagcagaacagaaa
caacctgctggtgagtaa
DBGET
integrated database retrieval system
