Gossypium hirsutum (upland cotton): 121203758
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Entry
121203758 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC121203758
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
gag-asp_proteas
RVT_1
Asp_protease_2
Asp_protease
RVP_2
Ty3_capsid
DUF2205
EzrA
Baculo_PEP_C
SKA1
Peptidase_A3
DUF1664
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
121203758
NCBI-ProteinID:
XP_040930143
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Position
A07:complement(88416244..88420476)
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AA seq
839 aa
AA seq
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MSKEVEGMETRGRARKASRSRDILSALEDRVVTLESSMGDIKERVEDVDDRLHDGLQSMQ
EQLKEYVTDNMKQLTGRDDAIEAMVVALKGEIAELKGELTIYKVALGNGGLAAAAPKPNI
DVPKPKKFKGTRSARDVDNFLWGIEQYFCAKGITEDVTKEEFRCEFKAQFYPEYAEDEAR
ARLRRLAQQGTVREYVQEFSKLMLQISDMGEKEAFFSFMNGLKQWAKQELQRRGVQKLTK
AMSVAESLAEFGGRKDNSNSSKPRLKGNSGGDKERPTRNGDGKKPWDKRKSGPIRCFHCE
GPHMIKDCPKKAALKAMEAKGESDMEDNNLGSILGGVEDRMSHGLMFVDIIVAGRKLNAL
VDTGASDLFMSEEVACKLGLKIDNEGGRIKTVNSKSIPIKGVAKGVDLQLGNWSGKVSIK
VIPLDDYDFVVGLSFLDQVKALIAPSSNYMVISDAKHQCMVKVTRKRSFEGKTLSAIQFA
KGVRRNEVSYLATLKIEETAKFVSETPKKVGQLLQSFRDVMPAQLPKSLPPKREVDHKIK
LVSNVVPPARAPYRMSPPELEELRKQLKELLDAGFIRPSKSPYGAPVLFQKKHDGSLRMC
IDYRALNKITVKNRYPIPLIANLFDQLGSARWFTKLDLRSGYHQVRIVEGDEPKTACVTR
FSKYATFIPATKECPAEEAARLFLRHVVKYWGVPLSIISDRDGRFTVTGQQPLTPNAVVT
HYTRPNPAAYRFAKDWQEKNDLVRACLHKASKRSKKWADQNRRDVQFQVGDSVLAKLHLI
LRYTGLHKGLVRRYEGPFKVVKRVGKVVYKLELPPKLKVHPVFHVSMLKPFHEDQEDPN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaagttgagggaatggagacccgtgggagggctaggaaagccagtcgctca
agggacatattgtcagctttagaggatcgcgtcgtcactctcgagagttcaatgggggat
atcaaggagagggttgaagatgttgatgataggctccatgatggactgcagtccatgcag
gagcagcttaaagagtatgtgacggataatatgaaacagttgactggtagagatgatgcc
attgaggctatggtggtggccttgaagggagagattgcggagctcaagggtgaactcaca
atctacaaggttgccttgggcaatggtgggttagcggctgccgcacccaagcccaatatt
gatgttcccaagcccaaaaagtttaagggaacaaggtccgcaagagatgtggacaacttt
ttgtggggaatcgagcaatacttctgtgccaaaggcatcacggaggatgtcactaaggag
gagtttcgatgtgagttcaaagcacagttttacccagagtatgccgaggatgaggctcgg
gcaaggttgcgtcggcttgcgcaacaaggcactgtgagggagtatgtacaggagtttagc
aagcttatgctccaaatctcagatatgggggagaaagaggcattcttttcctttatgaac
ggattaaaacagtgggcgaagcaagagttgcagcgccgaggagttcaaaagctcaccaag
gctatgtcagtagcagaatcacttgctgaatttggtgggaggaaagacaattccaattct
tctaaacccagattaaagggtaatagtgggggagataaagaaaggcccactaggaacggc
gatggtaagaaaccttgggacaagagaaagagtgggcctataaggtgcttccactgtgag
ggtccacatatgatcaaggactgtccaaagaaggccgctctcaaggctatggaagcaaag
ggggagtccgatatggaggataacaaccttggatcgatactagggggtgtcgaagataga
atgagccatggtttgatgtttgtagacatcattgtggccggcagaaaattgaatgcgctc
gtcgacacaggcgcttctgatttattcatgtctgaggaggttgcttgtaaactaggcctc
aagatagataatgaagggggtcggatcaaaacagtgaactcgaaaagtattccaatcaag
ggggttgcaaagggagtggatcttcagctcggcaattggtcagggaaggtatccattaag
gtaataccacttgatgactatgattttgtggtgggactaagcttccttgatcaggttaaa
gctcttattgccccttcgagcaattacatggtgatttcagatgcgaaacatcaatgcatg
gtgaaagtgacaaggaagagaagctttgagggaaaaacactatcagcaattcaatttgct
aaaggtgtacggagaaatgaagtctcatatttagccaccttgaagatcgaagagaccgct
aagtttgttagtgagaccccgaaaaaagtgggacaattgctacaatcatttcgagatgta
atgcctgctcagttgccaaaaagtttaccacccaagagggaggtggaccacaaaatcaag
ttagtatccaatgtggtgccgccagcaagggccccctatcgtatgtctccgccagaatta
gaagagttacggaaacaattgaaagaacttttggatgcgggattcattagaccatctaaa
tccccatatggtgcgccagtgttgttccaaaagaaacacgatgggtccttaagaatgtgc
atcgattatcgagctctaaacaagatcaccgtgaagaataggtatcctattcctcttatc
gcaaatttgttcgaccagcttggtagtgcaagatggtttaccaagttagatttaagatcg
gggtatcatcaagttcggatagtcgagggggacgaaccaaagacagcttgtgtgacacgg
ttttcaaagtatgcgacttttattccggcgaccaaagagtgccctgctgaggaagcagct
cggttattccttagacacgtggtgaaatattggggagtgccactatctattatcagcgat
cgagatggtcgatttactgtgacgggtcaacagccactcacacccaacgctgttgttacc
cattacacaagaccaaatccggcagcctatagattcgcaaaagattggcaagagaagaat
gacttggttagagcttgtttacacaaggcaagtaagcgtagcaagaagtgggctgatcag
aaccgaagggatgtacaatttcaagtgggtgactcagtccttgctaaactacacttgatt
ttacgatatactggtttgcacaagggtcttgtgcgaaggtatgaagggccatttaaagtt
gtgaagagagtgggcaaggtggtctacaagctggagttgccaccaaaacttaaagtacac
ccagtcttccatgtaagcatgcttaagccgtttcatgaggatcaagaagatccgaattga
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