Gossypium hirsutum (upland cotton): 121217902
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Entry
121217902 CDS
T04793
Name
(RefSeq) oxysterol-binding protein-related protein 1C-like isoform X1
KO
K20456
oxysterol-binding protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
121217902
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
121217902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
Motif
Other DBs
NCBI-GeneID:
121217902
NCBI-ProteinID:
XP_040950430
LinkDB
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Position
D05:complement(26558880..26566103)
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AA seq
826 aa
AA seq
DB search
MHPLCCISTVSDHSPVKPLPDNVAMPPHPPVTTVTTTSSSGSSFRSNSVRSTVQILCQSD
QNQNNQHRRSSSVDLNRMSQRNGTPLGREVSKALNLAPAPAPPPQVDVKINNIVGNGISG
VLYKWVNYGKGWKPRWFVLQDGVLSYYKIHGPDKIVVSQETERGSKVIGEESLRLISRHR
NSISRHSQNRRKPFGEVHLKVSSIRESRSDDKRFSIFTGTKRLHLRAEARDDRVAWVEAL
QAVKDMFPRMSNSELMAPMDNVAVSTEKLRQRLMQERVHELAIQDSEQIMKSEFSALQNH
LVLLKQKQSLLIDTLRQLETEKVDLENTVVDESQNKLIDLGASSMIRQDKSSGSSTDSDD
DNERVDAAEEETDEDDHTFFDTRDILSSSSFRSNGSDLRTSSFSSDDEGTIADDSEDNID
PYVKSVGSNFPSIKRRKKLPDPVEREKSVSLWSMIKENIGKDLTKVCLPVYFNEPLSSLQ
KCFEDLEYSYLLDRAYEWGKRGNNLMRILNVAAFAVSGYSSTEGRICKPFNPLLGETYEA
DFPDKGVRFFSEKVSHHPMIVACHCQGTGWKLWGDSNLKSKFWGRSIQLDPVGVLTLEFD
DGDVFKWSKVTTSIYNLILGKMYCDHYGTMRIEGNRDYSCKLKFKEQSIIDRNPHQVHGG
VQDRNGKTVATLFGKWDESMHYANGDCFAKGKGQDSLSETHLLWKRSKPPKYSTRYNLTR
FAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLERRQRQARNMQERGW
KPRWFAKDKNSDSYRFIGGYWEAREQGKWDSCPDIFGQIPSDHPLD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctctctgttgtatttccaccgtatcggatcattccccagtcaaacctttaccc
gacaacgtcgccatgcctcctcatccacctgtaactaccgtaacgaccacttcctcttcc
ggctcttcatttagatccaactcggttcgatctacggtccaaatcctgtgccagtccgat
caaaatcagaacaatcaacatcgccgtagtagtagcgtggatttgaatcggatgagccag
agaaatgggacaccgttgggaagagaggtttcgaaggctctgaatctggctccggctccg
gctcctccgccgcaagtggatgtgaagataaacaacatcgtggggaacggaatatcggga
gtgctttacaaatgggtgaattacgggaaaggttggaaaccgagatggttcgttttgcag
gacggagttttatcatattataaaatccacggtcctgataaaatcgtcgttagccaagaa
acggaaagaggatccaaagttatcggcgaagaatctctccgtcttatctcccgacatcgc
aattccatttctcgtcattcccaaaaccgtcggaaaccctttggtgaagtccacctaaag
gtttcctctataagggagagcagatcagatgataagagattctcgatcttcaccggaact
aagaggcttcatttacgagccgaggctcgggatgatcgggttgcgtgggtggaggcgctt
caggcggttaaagatatgtttcctaggatgtcaaatagcgagctcatggctccgatggac
aatgtggcggtttcaactgaaaagttgaggcaacggctgatgcaggaaagggtacacgaa
ttggctatccaagatagtgaacagattatgaagagtgaattctcggcattgcagaaccat
ctagtgttgcttaaacagaaacaaagtcttctcattgataccttgcgtcaattagagaca
gaaaaagttgatctggagaatacagtggttgatgagagccaaaacaagttgattgatcta
ggggcttcttctatgataaggcaagacaagtccagtggaagttcaactgactcagatgat
gataatgaaagagttgacgctgcagaagaagaaactgatgaagatgatcatacattcttt
gacactcgtgacattttgtcatcaagttctttcagaagcaatggatctgatctccggaca
tcatctttttcttctgatgatgaaggtactattgctgatgattctgaagacaacattgat
ccttacgtcaaatctgttggaagtaactttcctagcattaaacggcgaaaaaagttgcct
gacccagttgaaagggagaaaagtgtaagtctttggtcaatgatcaaggagaatattggg
aaagaccttacaaaagtttgtcttcctgtttacttcaatgagcctctctcttctcttcaa
aagtgttttgaggatctggaatattcatatctgcttgatcgtgcatatgaatggggtaaa
aggggaaataacctaatgagaattcttaatgtggctgcatttgctgtgtctggatattct
tcaacagaaggaagaatttgcaaaccctttaatccattattaggagaaacatatgaggct
gacttcccagataaaggtgtacgcttcttctcagagaaggtcagtcatcatcctatgatt
gtagcatgtcattgtcagggtacaggatggaagttgtggggtgatagcaatttaaagagc
aaattttggggtcgctcaattcagctagatcctgtgggtgtgttgaccttggagtttgat
gatggagacgtgttcaagtggagtaaggtgacgacatcaatatacaatctcatactggga
aagatgtactgtgatcactatggtactatgcgaatagaggggaatcgtgactattcatgt
aagctgaaattcaaggagcagtctatcatagatagaaaccctcaccaggtacatggtgga
gttcaagatagaaatggaaagacagtggctacattatttggaaaatgggatgagagcatg
cattatgcgaatggagattgttttgcaaagggaaaaggacaggactctttgtcagaaacc
catctgctctggaagcggagcaagcctcctaaatactccaccagatataacttaacacgt
tttgccatcacattgaatgagctcactcctggtctgaaggaaaagttgcctcctacagat
tcaaggctgagacctgatcaaaggtatctggaaaacggggagtatgaaatggcaaattca
gagaagctgcggttggagcggcggcaacgacaggctcggaacatgcaagagagaggttgg
aagccaaggtggtttgcaaaggataaaaacagtgattcatatcgatttattggtggatat
tgggaggctagagagcaagggaaatgggattcatgtcctgatatttttggccaaatccct
tctgatcatccccttgactaa
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