Gossypium hirsutum (upland cotton): 121220228
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Entry
121220228 CDS
T04793
Name
(RefSeq) RAN GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121220228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121220228
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121220228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
MgtE
Motif
Other DBs
NCBI-GeneID:
121220228
NCBI-ProteinID:
XP_040955564
LinkDB
All DBs
Position
D08:complement(5710126..5713617)
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AA seq
539 aa
AA seq
DB search
MGSGTQTFQHRSLSVKLWPPSHSTRLMLVERMTKNLTTPSIFSRKCGLLSNDEAEEDAKK
MEELAFAAADQHYKKEPDGDGSSAVQIYAKESSRLMLEVIKRGPKVNDGELADKATDLRG
TIFDISGGHREFIEAEEAKELLRPLGEPGNSYTKICFSNRSFGLDAANVAAPILSTIKDQ
LTEVDLSDFIAGRPESEALDVMNIFSSVLEGCHLRYLNLSNNALGEKGVRSFGALLKSQN
SLQELYLMNDGISEEAARAVSELIPSTEKLKVLHFHNNMTGDEGAFAISKIVKRSCSLED
FRCSSTRVGTDGGLALAEALKRCAHLKKLDLRDNMFGVEAEVALSKAISQFTDLTEVYLS
YLNLEDEGTEALAKALKHSAPSLEVLEMAGNDITAKGTASLAACIASKQFLTNLNLAENE
LKDEGAILIANALGEGHGQLNEVDMSTNAIRRAGGRHLAQVVVKKPGFKLLNINGNFISD
EGIDEVKEIFRGSLDMLGPLDENDPEGEDDEEEEDEDEEENAEHEKGLESKLTDLKINQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggatctggaacacaaactttccaacaccgctcgctgtctgtgaaattgtggccacct
agtcatagcacgaggctaatgcttgtagagcggatgacgaagaatcttacaactccatcc
attttctctagaaagtgtggcctattaagtaatgatgaggccgaggaggatgccaagaaa
atggaagagttagcttttgctgctgcggatcaacattacaagaaggagcctgatggtgat
ggaagttctgcagtgcaaatatatgccaaagaatccagtagactgatgctggaagttatt
aaaagaggcccaaaagttaatgatggagagttggcagataaagctactgatcttcgtgga
accatttttgatatatcaggaggtcaccgggaatttatagaggcagaggaggctaaggaa
ctattgagaccactgggagagccaggaaattcctatactaagatatgttttagcaacaga
agttttggtttagatgctgcaaatgttgctgcacctatcttatcaaccattaaagatcag
ttgacagaggtagacctttcggattttattgcaggaaggccagagtcggaagctctcgat
gttatgaacattttttcttcagtcctggaaggttgtcacttgaggtacctgaatctttca
aacaacgccttaggtgaaaaaggcgtccggtcatttggggcacttctaaagtcacagaat
agtttacaggaactttatttgatgaacgatggtatctcggaagaagctgcacgagcggtt
tccgagctaattccttctactgagaaactgaaagtacttcattttcataataacatgaca
ggggatgaaggtgcgttcgctatctccaagatagtgaaacgctcctgttcattggaggat
ttccgatgttcttctacaagagttggcacagatggtggtctggccttagctgaagcacta
aagagatgcgcacatttaaagaaacttgatctacgtgacaacatgtttggtgttgaagct
gaagttgctttgagtaaagcaatatctcaattcacagatctcaccgaggtttacctcagt
tacttgaaccttgaagatgaaggaaccgaggcacttgccaaagctctaaaacactctgca
ccttcacttgaagttcttgaaatggctggaaacgacattacagccaaaggcaccgcttcc
ttagcagcctgcatcgcatcgaaacagttccttacgaacttaaacttagccgagaatgaa
cttaaggatgaaggagctattttgattgccaatgcattaggagagggtcatggtcagttg
aatgaagttgatatgagcacgaatgccattaggcgagccggtggtagacatttggctcag
gtggtcgtgaaaaaacccggattcaagttgctgaatatcaatggaaatttcatatccgac
gaagggatagatgaggtgaaggaaatatttagaggttccctcgatatgctgggacctttg
gacgagaatgatccagaaggagaagatgatgaggaagaggaagatgaagacgaggaggag
aatgcagaacatgagaagggattggaatccaagcttacggatctcaaaatcaaccaatga
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