Gossypium hirsutum (upland cotton): 121228123
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Entry
121228123 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHORT ROOT IN SALT MEDIUM 1-like
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
DBC1
BURAN
LAIKA
Motif
Other DBs
NCBI-GeneID:
121228123
NCBI-ProteinID:
XP_040967206
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Position
A04:complement(89043484..89052939)
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AA seq
952 aa
AA seq
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MYSSRGTNAYGQQPYVGQSGYAQNLGAGYSSSSVGGPDGGAQMSLSSRHSSILGSSQDTE
VGGYRALPSVSAHYGGQYSSIYGTSALSATQQVPAASSKGAGASALEARNAYASALPDSP
KYASTDYVSSASHSYSHKGDQMYAEKIPDYPTVERRQFGERQGSYLGRDLSSEPTGRYSD
SAFFGHQHQPDIYDRLDQAVLLRQEQLLKAQSASHDSSSRQADYLAARSAAGRHSAQDLL
SYGGRIEADPRSLSLLSSSSSYGGQTPSILGAAPRRNVDDMMYPPSSANPGYGVSLPPGR
DYGTKGLHVTTLETEYPGSTLSRSGLPRIDERKDDRAGYLREFEMREEERRREHLREREK
DRERERERERERERERLRERERERERLRILERREKEREREKERERERKRALEVTRARTPP
RVSRDHRGPSLTKEARPVKRESPRREASHRRLSPVKEKRREYVSKVYTSNLIDVERGYLS
IDKRYPRLFVSPEFSKVVINWPKGNLKLSMHTHVSFEHDFIEDNLVESKELSSKLLPVEP
EKPEQGSTVWNAKMMLMSGLSRSSLEELSSEKSXDDRIPHICNILRFAVLKKDHSFMAIG
GPCVSADGSNPAGDEFSLTQTALRYAQDVVNLDLQKCQHWNRFLEIHYDSWQDGLFSHKE
VTVLFVPDLSECLPSLDEWRAQWLAHRKAVSERERQLSLKREKSKERKEGSKDKEADNTK
QTERGKSGKRLCPCHLVMDEITVEGGPGKRKWRSATAKPGCEVREEKDYKRIVKQKVANK
TAAEVNTASKPSNKVEDAGEQNTKSEIGSQLEESSAGSAGIKLLPEEGYKKEAVECGGED
EKKVVLAGTETSNVGKQQVQKNKLRPVVTFTDSLLDYTDKDIEESTFELSLFAEVLYEML
QYQMGCLFSFSRTSASGIVREQHRKGRHILYDKLVVVYLKLGVHRCLSVLHQ
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgtccagagggacgaatgcctacgggcagcaaccttacgttggccaatccgga
tacgcccaaaatttgggtgctggttattctagtagttctgttggaggtcctgatggggga
gctcaaatgtccttgtcttctcggcattcatcaattttaggtagttctcaagatactgaa
gttggtggatacagagcccttccctcagtttcagctcattatggggggcaatatagctcc
atatacggcacatctgctttgagtgctactcagcaggttcctgctgcaagttccaaaggg
gctggagcatcagctttggaagctcgtaatgcttatgcctcagctctgccagattcacca
aaatatgcatctactgactatgtttcatctgcaagtcacagttatagtcacaaaggtgac
caaatgtatgctgagaagattcctgactatcctacagtggagagaagacaatttggagaa
cggcagggtagttatctggggagggatttgtctagtgagccaactggaagatattctgat
tctgctttttttggtcatcagcatcagcctgacatatatgatcgtcttgatcaagctgtc
ttgcttcgacaagaacaattgctcaaagctcaatcagcctctcatgatagtagttcaaga
caagctgattatcttgcagcaaggagtgctgctggtcgacattccgcacaagaccttctg
tcttacggaggaagaatagaggccgatccccgcagtttatctttgcttagctcttcttct
tcttacggtggacaaactccttcgatattaggggcagctccaaggagaaacgttgatgat
atgatgtatccacctagttctgcaaatcctggttatggagtgagcctaccacctggtaga
gattatggaacaaaggggcttcatgtgacaacccttgagactgaatatcctggtagcaca
ttgtcacgcagtggtcttcctaggattgatgaacgcaaggacgatagggctggttacctt
agggagtttgagatgagagaggaggagcgtcgtcgggagcatttgcgtgaaagagagaaa
gacagagagagggagagggagagggagcgagaacgagaaagagaacgactaagagaacgg
gaacgagaacgtgaacgtttgcgcatcttggagcgacgggagaaggaaagagagcgggag
aaggaaagagaacgagagcgcaagcgtgcacttgaagttacacgtgcaagaactccgcca
agagtttctagggaccaccgaggtccatctttgacaaaagaggctcgacctgtgaagcga
gaatccccacgtcgtgaagcttcccataggcgcctttcacctgttaaagaaaaaaggaga
gaatatgtaagcaaggtatatacatccaacttgatagatgtagagagaggttatctgtca
attgataagcgatatccaagactttttgtgtctcctgaattttcaaaggttgttataaac
tggccaaaggggaaccttaagctctctatgcatactcatgtcagctttgagcatgatttc
attgaagataatttagttgaatccaaagaactttccagcaagcttttgcctgttgagcct
gaaaagccagaacaaggaagtacagtgtggaatgcaaagatgatgttgatgagtggatta
agcaggagttctttggaagagctgtcatctgaaaaatccnctgatgaccgtatacctcat
atttgcaatattctaaggtttgctgttcttaaaaaggatcattctttcatggcaattggt
ggaccttgtgtttctgctgatggcagcaatcctgctggtgacgagttctctctaactcaa
acagcccttagatatgcgcaggatgtagttaatcttgatttgcagaaatgtcagcattgg
aatcgtttccttgagatacattatgacagttggcaggatggactgtttagccataaagag
gttaccgtactgtttgttccagatttatctgaatgtctcccttcacttgatgaatggcga
gcccaatggttagctcatagaaaagctgtttctgagagagagcgccagctgtctttgaaa
agagagaaatcaaaggagaggaaagaaggatcaaaagacaaggaagcagataatacaaag
caaactgaaagaggcaaatcaggaaaaagattatgtccatgtcatctagtgatggatgaa
ataactgtggaaggaggtcctgggaaaaggaagtggagaagtgctactgctaagccaggt
tgtgaagtccgtgaagaaaaagattataagaggattgtcaaacagaaggttgctaataag
acagctgcagaagtaaatactgctagcaaaccgagcaacaaggttgaagatgctggagag
cagaatactaaatcagagattggcagtcagctggaagaatcttctgctggtagtgcaggg
attaaacttttgccggaagaaggttacaaaaaggaggcagttgaatgtggtggtgaggat
gagaaaaaggttgttttagctggaactgagacctcaaatgtaggtaagcaacaggttcag
aaaaacaagttgcgtcctgttgtcactttcactgattcacttttggattatacagacaag
gacattgaagaatccacatttgagctttcattatttgctgaggtgctttatgaaatgctt
cagtatcaaatgggttgcctattttcattttccagaactagtgcaagtggcattgttaga
gagcaacacaggaagggacgtcacattctttacgataagctggttgttgtctacttaaag
cttggggtccatagatgtttatctgttttgcatcaatga
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