Gekko japonicus (Schlegel's Japanese gecko): 107105449
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Entry
107105449 CDS
T04299
Symbol
PAN3
Name
(RefSeq) PAN3 poly(A) specific ribonuclease subunit
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107105449 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107105449 (PAN3)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107105449 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
107105449 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
107105449
NCBI-ProteinID:
XP_015260895
LinkDB
All DBs
Position
Un
AA seq
702 aa
AA seq
DB search
MTNSSSSPSLLNDSAKSYAGHDPLTSPASSLFNDFAALSLSQRRKPRKYRLGMLEERIVP
VGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQTPNPAASEFIPKGGSTSRLGN
MSQSNISAFSQALFSHPSMGGPANAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP
NPANYMVPTSASTPVTNAVSQPPATGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIY
PPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPTVPTEVDSYHSLFP
LEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQ
HSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQHDGPL
PRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGVFDV
LTFDNSQNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDL
KNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLA
KLGTINERPEFQKDPAWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAG
VPEKISLISRDEKSVLVVTYSDLKRCFENTFQELVAAANGQL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagcagcagttcccctagccttctcaatgacagtgccaagtcgtatgcaggc
catgatcctctaacttcacctgcttcgtccttgtttaatgactttgctgctctcagctta
tctcaaaggagaaagccaagaaagtatcgactggggatgctggaggagaggatagttccg
gtgggatcaaaggcacggaaatcaaagaatcctattggctgcctggctgacaggtgtaaa
acaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagaca
ccaaatccagctgcaagtgagtttattcctaaaggagggtcgacctcccgacttggtaac
atgtcacagtcaaatatatctgccttctctcaagccttgttctctcatccttccatggga
ggtcctgcaaatgctggactagctccaggaatgtcactgtcagcaggatcttctcctctt
cattcccctaagattactcctcacacgtctcctgctcctagacgaagaagtcacacacca
aacccagcaaattatatggtgcctactagtgcctctacgcctgtgactaatgctgtctcc
cagcccccagctactggtcaggtgattcagaaggaaactgtgggaggcacaacctatttc
tatactgacacaactccagcacctctaactggaatggtattcccaaactatcacatctat
cctccaactgcacctcatgttgcttacatgcagccaaaagcaaatgcaccttccttcttt
atggcagatgaacttagacaggagctgatcaacagacacttaattacgatggctcagata
gaccaagcagatatgcctactgtcccaacggaagtggacagctaccacagccttttccct
ttagaaccactgccaccacccaatcggatacagaaaacaagcaactttgggtacataaca
tcatgctacaaagctgtaaatagcaaagatgatctgccatattgccttcggaggatacat
ggttttcgtcttgttaacacaaagtgcatggtgttggttgacatgtggaaaaaaatccag
cactctaatattgtgacgttgcgagaagtattcaccacaaaagcatttggagagcattct
cttgtgtttgcatatgatttccatgctggaggagagactatgatgagcagacacttcaat
gatcctagtgccgatgcctatttcacaaaaagaaagtggggtcaacatgatggacctctg
ccccggcagcatgctgggttgttacctgaatccttgatttgggcttatattgtgcagctc
agctctgcattgcggaccattcatacagcaggattggcctgtcgagtaatggaccccaca
aagattctggtaactgggaaaacaaggttgcgagtaaattgtgttggagtctttgatgtg
ttaacattcgataacagccaaaacaatcccttggcgctaatggcccaataccaacaagct
gacttaatttccctagggaaggttgtgttggctttggcttgcaattccttggcaggaatt
cagagggagaatttacagaaagctatggaactggtgacaatcaactattcctctgatttg
aagaatcttattttgtatttgctgactgaccaaaacaggcttcgaagtgtaaatgatatc
atgcctatgattggtgcacgattctacacacagttggatgctgcccaaatgagaaatgat
gtaatagaagaagaccttgcaaaggaagttcagaatggaagattatttcggcttcttgca
aaattgggaacaatcaatgagaggccagaatttcagaaggacccagcatggtcagaaact
ggagacagatatctcctgaagctctttagggatcatcttttccatcaggtgacagaagcg
ggtactccctggatagacctcagtcacattatctcttgtcttaacaagctggatgctggt
gtgccagaaaaaataagcctcatttccagagatgagaagagtgtgcttgtggtaacgtat
agtgacctgaagcgctgctttgaaaacactttccaagaactggttgcagccgctaacggg
cagttgtag
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