Gekko japonicus (Schlegel's Japanese gecko): 107108901
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Entry
107108901 CDS
T04299
Symbol
ARID1A
Name
(RefSeq) AT-rich interaction domain 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107108901 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107108901 (ARID1A)
03021 Transcription machinery [BR:
gja03021
]
107108901 (ARID1A)
03036 Chromosome and associated proteins [BR:
gja03036
]
107108901 (ARID1A)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Helix-turn-helix
ARID
107108901 (ARID1A)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107108901 (ARID1A)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107108901 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107108901
NCBI-ProteinID:
XP_015264931
LinkDB
All DBs
Position
Un
AA seq
2296 aa
AA seq
DB search
MAAQVAPATAATSLGAPAPSDLKKAEPPRDCSSEETGGEAAAAEKQHQPSSESDSPPGKE
LQDGAESNGGGAGAEADLKSSNGNPGPRPGGGTSSLNNNLPEPPGGGSNSSDGVGTPQQQ
QPPPPPPLQQPPIPAPHPAALAPPAYGFGQAYGRGAQAAAAVAFHQHGGQQSPGMAALQS
GSLEQPYPGPTGAPPQNSHGSPATGPAATDHGFANHQYNSYYPAAGRSAGAYPPPPQAYA
LASPRGNGQSPAQAGPKPPATAFQQQQRFGAMGPSTAGGGGGGGGGGGGGGPGGGATPQP
TSTPTLNQLLTSPSSARGYQAYPGADYGSGPQDGSGGAASKAPAATAADIASQYTGATTG
QGWVAAAAGGGGQQRSHHAPMSPGSSGAGGGQPLARSQQPSSPMDQMGKMRPQPYGGNNP
YVQQQGPQSGQQQGHGYPGQPYGPQTPQRYPMGMQSRTQTAIGTVSYAQQIPPYGQQGPS
GYGQQTQTPYYNQQSPHPQQQQQPSYAQQPPSQTPHSQPSYQQQQTQSQPPQLQSSQPPY
SQQPSQPPHQQSPSPYPQQQSSAQQHPQSQPAYSQQQSQSPYQQQQTQQSVTSALSQQTA
SYPQSQSQQQSAYSQQRFPPPQEISQDSFGSQASSAASMASSKGQEDVNLNLQSRPSSLP
DLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPV
GSPASVAQSRSGPLSPAAVPGNQMPSRPPSGQSDSILHPSMNQSTIAPDRGYIQRNPQMP
QYNSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMPN
ANYPSPGMGGSMNPMGAGSQIHGQTGVPPYPGLPPGRMSHAAMGTRPYGPNMANMPPQVG
TGMCPPPGGMNPKAQQVAAAAMHAAATNSIQNRPSGYPNISQGGMMGTGPLYGQGINSMA
GMLNPQGPPYSMGGNMANNSAGMAASPEMMGLGDVKLTPAPKMNNKADGTPKAESKSKKS
SSSTTTNEKITKLYELGGEPERKMWVDRYLSFTEEKAMGMTNLPAVGRKPLDLYRLYVSV
KEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIF
ATDSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMAPLPGI
RSNSVGLQDTFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKGS
DPFMSTGQGPNSGMGDPYNRAAGPGMSNMAMGQRQHYPYSPYDRVRTEAGXXXXMGPEAN
LGSATPQPNIMPSTPDSGMYSPSRYPQQQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQT
TLYQPQQQNYKRPMDGNYGPPAKRHEGEMYSVSYSTGQGQTQQQLPPAQTQQPSQQQTAQ
PSPQQEMFNQYGSTYSTTDRRPGGPQNQFPFQFGRDRVSAPPGSSTQQNMPPQMMGGPVQ
STPEGPQQGSMWQGRNEMGYGYPNRQSPGSAPQGPAYHGVNRTDEMLHPDQRVNHEGPWP
SHGNRQPPYGPSAPVPPMTRPPQPNYQTPPSMQNHIPQVSSPAPLPRPVENRTSPSKSPF
LHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTTKDIGT
PEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIE
IFGILKEYEVGDPGQRTLLGPERFCKSSSPAPEDGEKEQPRSPNCEEKEEEEEEEGEEEA
AFTNKAAAPLENEEKLVSKFDKLPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGG
DTTEHIQTHFESKMELPLAHKRASCSSVLRKRSVVESNPGAQEGGSLPLDGPPEKRITAT
MDDMLSARPGALAEEEEVRNVEVTKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCT
LLDWQDSLSKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPL
TYEKEEEQDQGVSCNKVEWWWDCLEILRENTLVTLANISGQLDLSPYPESICLPILDGLL
HWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYS
TMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQ
QSQASLMHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNS
LVSQVICDVLFLIGQS
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggcccccgccacggccgccactagcctgggcgccccggctccgtcg
gacctcaagaaagccgagccgccgcgggattgttcgtcggaggagactgggggcgaggcg
gcggcggcggagaagcagcaccagccgtcgtcggaaagcgatagtcccccgggcaaggag
ctgcaggacggggccgagagtaatggcgggggcgcgggggccgaggccgacctgaagagc
tccaacgggaaccccggtcccaggcctggcggcggcacctcttcactgaacaataacctg
ccggagccgcccggcggtgggagcaacagcagcgacggggtggggacgcctcagcagcag
cagccgccgccaccgccgccgcttcagcagccgcccatccctgctcctcacccggctgct
ttggccccgccggcgtacggcttcgggcaggcgtatggccggggcgcccaggctgcggcg
gccgttgccttccaccaacatggcggacaacaaagccctggcatggcagcgctgcagagt
gggagcctggagcagccgtacccggggcccacgggggcccctcctcagaactcgcacggc
agccccgcgactggcccggcggcgacggaccacggcttcgccaaccaccagtacaactct
tactacccggcggccgggcgcagcgcgggcgcctacccgcctccccctcaagcctacgcc
ctcgcctcgcctcgggggaacgggcagagccccgctcaggccgggcccaaacctccggcg
acggctttccagcagcagcagcgttttggggccatggggccttcgacggccggtggcggc
ggtggaggaggcggcggcggcggaggaggaggaccaggcggaggggctaccccgcagccc
acctcgacccccacgctcaaccagcttctcacctccccgagctcggcccggggttaccaa
gcctaccctggggccgactacgggagtgggccccaagacggtagcgggggagctgcaagc
aaggccccggcggcaacggccgcggacattgcctcgcagtacaccggcgccaccaccggg
cagggctgggtggcagccgccgccggaggaggaggccaacaaaggagccaccacgcgccc
atgagcccaggcagcagcggggctggagggggacaaccgctcgccagaagccagcagcca
tccagcccaatggatcagatggggaagatgagacctcagccttatggaggaaacaaccca
tatgtacaacagcagggacctcagtcagggcaacagcaaggtcatggatatccagggcag
ccatatgggccacagactcctcagagatacccaatgggaatgcagagcaggacgcagact
gcgataggcactgtctcttatgcacaacagattcctccttatggacagcagggccccagt
ggatatggacagcagacccagactccctattacaaccagcagagtcctcatccccagcag
cagcagcagccttcatatgctcagcagcccccatctcagacccctcactctcagccttct
tatcagcaacaacaaactcagtctcagcctccacagctccagtcctcccagcccccgtac
tcacagcagccgtcacagccaccccatcagcagtcgccatctccatatcctcagcagcag
tcctctgcccagcagcatccacagagtcagccagcctattcgcagcagcagtctcagtca
ccttaccagcaacagcaaactcagcaatctgttacctctgcgctttctcaacaaacggca
tcttaccctcagtctcagtcacagcagcagtcagcatattctcagcagcgcttcccacct
ccacaggagatctcacaagactcatttgggtcccaggcatcgtctgctgcctcaatggct
tccagtaaagggcaagaagatgtaaatttgaatctacagtcacgaccatctagcttgccg
gatctgtctggttcaatagatgatctgcccatgggtacagaaggagcactgagtcctggc
gtcagcacatcagggatttccagcagtcagggagagcagagcaacccagctcaatctcct
ttctctccgcatacctctcctcacttgccaggcatccgaggaccttcaccatcgcctgtc
gggtctcctgctagtgttgctcagtcacgctctggcccactctcccccgctgcagtgcca
ggtaaccagatgccatctcgaccgcccagtggccaatcggacagcatcttacatccttcc
atgaaccagtcaaccatagccccagatagaggttacatacagaggaatccacagatgccc
cagtataattcccctcagcctgggtccgccttatctccacgtcagtcttctggaggacag
atgcacgctgggatgggaccttatcaacaaaattccatgggcagttatggacctcaggga
ggtcaatatgggccacaaggtggctatcccaggcagccaaactacaatgctatgcccaat
gcaaattatcccagtcccggaatggggggaagtatgaacccaatgggagcagggagccag
atccatggccagactggtgtccctccctatcctgggcttcctccaggaagaatgagccac
gctgccatggggaccaggccctatggacccaacatggcaaacatgcctccccaggtaggg
actggaatgtgtcctcctccaggtggcatgaacccaaaagcacaacaagtcgccgccgcc
gctatgcatgctgctgccaccaactcaatccagaataggccatctggctaccccaatata
agccaaggtggaatgatgggcactggacctctgtatggccaaggtatcaacagcatggct
ggcatgctaaatccccagggcccaccatattcaatgggtggaaatatggccaacaattct
gcagggatggctgcaagtcctgagatgatgggacttggtgatgtcaagctcacgcctgca
cctaaaatgaacaataaagcagatgggacaccaaaagctgaatctaagtcaaagaagtcc
agctcctccactaccacaaatgagaagattactaagttatatgagctgggtggtgagcca
gagaggaagatgtgggtagatcgctatttgtccttcactgaagagaaagcaatgggcatg
accaatcttccagctgtgggccggaaacccctagacctgtatcggctctatgtctcagta
aaggagattggaggactgactcaagttaataaaaacaagaaatggcgtgagttagccacc
aatttgaatgtgggcacttctagcagtgcagctagctccttgaagaagcagtacatccag
tgtctctatgcctttgagtgcaagatagagcgaggtgaagaccctcctccagacatcttt
gcaactgattcaaagaagtcacagcccaaaatacaacctccatctccggcgggttcaggc
tccatgcagggcccacagacccctcagtccaccagtagctctatggcagaaggaggagac
ctgaagcccccaactcctgcatcgacaccacacagtcaaatggcccctttgccaggcatc
aggagtaactcagtaggtcttcaggatacctttcccgatggcagtgaccccactttccag
aagaggaactccatgactccaaatccagggtaccagcccagcatgaatacttctgacatg
atgggccgcatgtcctatgagccaaataaggatccatatggcagtatgagaaaaggaagt
gatccctttatgtccacagggcagggccctaacagtggcatgggcgatccttataatcgt
gctgcaggcccagggatgagtaacatggctatggggcagaggcaacattatccttatagc
ccatatgacagagttcggactgaagcaggaatnnnnnnnnnnatgggacctgaagccaac
ttaggaagtgcaacaccccagcccaacattatgccttccactcctgattcagggatgtac
tctcccagccgttatcctcagcagcagcagcagcaacagcagcagcgacatgattcctat
ggcaatcagttttccactcaaggtacatcctctggcagcccctttccgagccaacaaacc
accctctatcaaccacaacagcagaattacaaacgacccatggatggcaactatggcccc
ccagccaaaagacatgaaggggagatgtacagtgtatcgtatagcacaggccagggccaa
acccagcagcagctgcctccagcgcagacccagcaaccaagccagcagcaaactgctcag
ccttccccacagcaggaaatgtttaaccagtacggaagtacatactccaccactgaccgc
cgacctggcgggccgcagaaccagttcccattccagtttggccgagatagggtctctgct
cccccgggctccagcacacaacagaatatgccacctcagatgatgggtggtcctgttcag
tccactccagagggccctcagcagggcagcatgtggcaagggcgtaacgagatgggctac
ggctatcccaaccggcagagtccaggctctgcaccacaagggcctgcttatcatggagtg
aatcgaacagatgaaatgctacacccagatcagagagttaatcacgagggaccatggcct
tctcatgggaaccgtcagcctccttatggtccctctgcccctgtgccccccatgactagg
ccgccacagccaaactatcagaccccacctagcatgcagaatcacattcctcaggtatct
agtccagcacctcttcccaggccggtggaaaaccgcacctctccaagtaaatctccgttt
ctgcactcgggaatgaaaatgcagaaggcagggcccccagtccctgcctcacatataaca
ccagcggccgtacagcctcctatgatacgacgggacatcacattcccacccggatcagtg
gaagctacacaacctgtgctgaagcaaaggcggcgtctgaccacaaaagacattggtacg
ccagaagcctggcgagtgatgatgtctctgaagtctgggttattggctgaaagcacttgg
gccttagataccatcaacatcctactttatgatgacaacagcatcatgaccttcaacctc
agccagctgccaggattgttggagctactggtggaatatttccggcgttgcctgattgaa
atatttggaatcctgaaagaatacgaggtgggagatccagggcaaagaacattattgggt
cctgaaaggttctgcaagtcttcaagtcccgcacctgaagatggggagaaagagcagcca
cggagcccaaactgtgaggaaaaagaggaggaggaagaggaggaaggggaagaagaggct
gccttcacaaataaagctgcagcgcctctagagaacgaggaaaaactggtcagtaagttt
gacaagcttccagtcaagatagtgcagaagaatgacccatttgtggtagattattcagac
aaacttggccgggtacaggagtttgagagtgggctgctgcactggcggattggtggggga
gacaccactgaacacattcaaacccacttcgagagcaaaatggagctgccgctggctcac
aaacgagcttcctgcagctctgttttgcgaaaacgttctgtagttgagagcaacccgggt
gcccaagagggagggtcccttccattggatggtcctccggagaaaaggataacagcaact
atggatgacatgctttcagcacggccaggtgcgttggcggaggaggaggaggtcaggaat
gtggaggtgacaaaggagagcagtaaattcccatttggcatcagtcctgctcagagccac
cgaaatataaaaatattggaggatgagcctcatagtaaggatgagacacctttgtgtacg
cttctagactggcaggactcgctgtctaaacgctgcatctgcgtgtctaatatcatcagg
agtttatcatttgtgccaggtaatgactttgagatgtccaaacaccctggtctgctgctg
attctagggaaactgattcttcttcaccataagcatccagaacgcaagcaggcaccactg
acctacgagaaagaggaggagcaggaccaaggcgtgagctgcaacaaagtggagtggtgg
tgggactgcttggagatcctgcgtgagaacacgctggtcacactggccaatatctctggg
cagctagacctttcgccatacccagagagcatctgcttgcctatcctagatggactcctc
cactgggccgtgtgtccttctgcagaagcccaagatccttttccaactctgggtcctaat
gctgtcctctcgcctcagagactggttttagaaactctcagcaaactcagcatccaggac
aacaatgtggatttgatccttgctacaccacccttcagtcgcttggaaaaactctacagc
accatggtgcgtttcctcagtgacagaaagaacccagtttgccgggagatggctgtggta
ctactggccaacttggcacagggcgacagcttggcagctagagccattgctgtgcagaag
ggcagcattggcaacttgttaggctttttggaggacagcctggcagctactcagttccaa
cagagccaagccagtttgatgcacatgcaaaaccctccctttgagccaacgagcgtggac
atgatgcgccgggccgcccgggcactgcttgccttggccaaagtggacgagaaccactcc
gagttcacgttatatgagtcacggctcttggacatctccgtgtcacccttgatgaactca
ttggtctcgcaagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
