Gekko japonicus (Schlegel's Japanese gecko): 107112804
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Entry
107112804 CDS
T04299
Symbol
COL6A3
Name
(RefSeq) collagen type VI alpha 3 chain
KO
K06238
collagen type VI alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107112804 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107112804 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107112804 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107112804 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107112804 (COL6A3)
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107112804 (COL6A3)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107112804 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
107112804 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
DUF6559
YjeF_N
Motif
Other DBs
NCBI-GeneID:
107112804
NCBI-ProteinID:
XP_015269479
LinkDB
All DBs
Position
Un
AA seq
2908 aa
AA seq
DB search
MWKHRHLPFAAIFCLLLSGCWDIADAQTKLDVKNGAAADIIFLVDSSWSIGKEHFQLVRE
FLYDVVKQLDVGGNDFRFGLVQFSGYPHTEFQLNTYDSMQDILSHISHMTYIGGGTKTGE
GLEFLIQNHLTKVAGSRASDGVPQIIIVLTDGRSQDDVVLPSSVLKYADVNMFAIGVQDA
VEGELKEIASEPLDTHLFNLENFAALHGIIGDLVASVHSSVTPEMAGANAVIKDITAQES
ADIIFLIDGSNNVGAVTFAAFRDFLANFLERLPVGDEQIHIGVVTYSDRPRTVFSLDDHT
NKADVLDAMKALSFLGGEEANMGEALEYVVQTHFTKSGGSRVEEGVPQVLVLISGSESSD
DIREGVLAIKRASVFTFCIGVQNADQVELQHIATDGSFVFIALDTRNLDELQELLLPNIA
GVAQRLILLDAPTVLTEVTEANQKDIVFLIDGTTIQGNAPFNGIREFLSKVINRLEVGAD
KIQVSVAQYSDTVRTDISFSTPQDKNAIVSSIRKLKPLGGSVHNTGSALRYVKDNLFTSA
AGCRIDEGVLPLLVLVTGGKSRDDVALPAQELKGRGILAIAVGAVNADRAELEQVAFSPT
LVFTTSDFRPATMLPRIPDILTNIRTLSGTVVETTTTEVLANKRDIIFLLDGSANVGNAN
FPFVRDLVVSLVRFLEVGIDDVRVGLQDMIRPLMTYVSGDVEEVTIPSAESKKDILFLTD
GSAYLGGQFPAVREFLLRVISDLDVKPEGTRVAVAQFSDNAQLEFNFEEIPSKENILQKV
RKMRVKSGRLLNIGAALEYALRDIFVRNAGSRIEEGVPQFLVLLAAGRSSDNVESAANAL
KRANVVPFVIRARSADAAELEKIVYDPNFILQADDLVRIGDIRPKIVNLLKTVELAPRVV
EVQKKDVVFLLDGSDGIRRSFPSLVSFVENIVRSLDVGPDDIRVAVAQYSNVPKVEFLLN
VHPDKTAVINAVRRLSPMGGSPLNTGAALNYLVRNVFTSQSGSRVAEGVPQFLILVTADK
SRDDVTRPAAALKGTGAVPFGIVDGKRDIVFLIDGSQFAAPDFSSVREFIERLVNNLNVD
ADATRVAVIQFSEDPRVEFLLNAYSTKDEVQNAVRGLRPKGGRRVNVGSALEYVSKNIFT
RPSGSRIEEGAPQFLILLFSRPSDDEVEDPAIEVKQIGVAPLAVARNVDTEELVKIALSP
EYVFQVSTYRDLPSLEQRLLTPVTTLTTQQIQRLIGDTRPPPDIDRDAKDLVFLIDSSSG
VGADGVAHIRDFILRFVQQLDVGENKVRIGLVQFSNDVFPEYFLRDSKSKSLALNAVRRL
RFRGGAPLNVGKALDYVVKNFFVKSAGSRREDGVPQHLVLLLGGRSQDDVSRPSSVMQGF
GIKSLGVGARNADSAELQRITGAPRTAFIVREFTDLPTIERKIFASFQQLPEPPTEPEVP
TGPAGKKQADVVFLLDSSINFGRDNFQQVTDFVAGIVDAIYEDRDSIQVGLVQYNSDVSD
EFFLKDFPNKQQIIDAIEKVAYKGGRVSNAGAAIRHVQAKHFVKEAGSRAEQKVPQIAFI
VTGGRPDDDAYAAASALARTGTKVFAVGVKNIDLGEVAQLSSDGTTAFRSATTAAMSDLN
EAVLVTMADVMKQQLCQVGGEVSRDCYLDIILGFDVSDVGPQQSIFTAQRVLETKVEDIL
NRITQIQRISCTPNQTPSVRVALLAQTPSGVVEAFDFSEYQPELFEKFQAMHNRGPFVLN
AETLKSYQNKFATSPTGNVKVVIHLTDGIDGSREQLKAATADLKREGVKAFILVGLERVS
DFEDVMQLEFGRGFTYNRPLRVNLQDLDFELAEQLDNVAERACCGVACKCSGQRGDRGLP
GTAGPKGAPGEDGYRGYPGDEGGPGDRGPLGINGTQGFQGCPGERGAKGNRGFPGEKGEL
GEIGLDGIDGEEGDRGHPGSPGERGSPGRRGDKGGKGEQGERGDRGLRGNSGAPGADSTQ
RGSRGQKGELGPMGDPGADGPPGASGGPGRNGGQGRRGPPGIKGNRGLPGPAGSVGEQGT
RGPQGPPGQAGTPGLRGEQGIPGPRGGGGPPGAGGERGRLGPLGRKGEPGDPGPKGPAGP
VGPRGETGDDGRDGVGRAGTKGRRGEPGFPGYPGPKGAPGDRGGIGDSGPKGNRGYRGTP
GEPGIRGQKGERGYGGPAGHKGDRGESRDQCALVRNIKDKCPCCYGPKECPIYPTELAFA
IDTSSGVTADIFNRMRQAVLAIVNDLTIAESNCPRGARVALVTYNNEVTTEMRFADSRKK
ARLLNQIEALRAIQTTKQRSLETAMSFVARNTFKRARSGFLMRKVAVFFSNGPTRRSPQL
NEAMLKLYDAGVVPVFLTSRDDPILRSALQSNNSIGGQVITFSGGPAQVNQTIRSVITCH
ICLDVCDPDPSCGAARPAFGRDRRAAVTDVDIDMAFILDSSESTTPLQFREMKKYIAYVV
SQLETSSDPKASLHHARVAVVQHAPYEYASNSSASPVRVEVSLTDYSSKDKLMDFIGNQM
VQLQGTRAVASAIEHTIRLIFEQAPNPRDLKVIVLMITGEVNGQELERLQKVVVEAKCKG
YFFVILSTGRQVNIRSIYSLASEPNDVFFKYADKPSEFHEEPLLRFGNLLPSFISSENAF
YLSPDVRKQCDWFQGDQPVKRIAQRPVNIPNNVTAAPATTKPTTKSTTTKATTTKPTTTK
ATTTKPTTTEATATKPTIEKLEVVKHVGEVQVTDITENSAKLRWVDPEPQHAAVYDITIT
LAHDDSLVLKLNLTGTERVIGGLGSGQKYHVLVTGYLNAQARSTYKGTFSTKAMPLPKLP
SPAVAHLMVNTEPLEEPITVESICNLKKEEGTCRNFILKWYYDTVTKSCARFWYGGCGGN
DNRFNTQNECEITCFSARVNSGVMTIGT
NT seq
8727 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacatcgacatttaccctttgcagcaatcttttgccttttactctcaggctgt
tgggacatcgctgacgcccagaccaaacttgatgtcaaaaacggtgccgctgctgatata
atatttctagtggattcctcttggagcattggaaaggaacatttccaacttgttcgggag
tttctgtatgatgttgtaaagcaattagatgtgggtggaaatgattttcggtttggtctg
gtccagttcagcggatacccacataccgagttccagttaaacacgtatgacagtatgcaa
gatatcctctcccatatctcgcacatgacctatatagggggaggaaccaagactggagaa
ggattagagttcctaattcagaaccacctcactaaagttgctgggagcagagcgagtgac
ggagtcccccagattattatagtcttaacggacggacgatcccaggatgacgtggtcctg
ccatcctctgttcttaaatatgccgatgtcaacatgtttgccattggagttcaggatgca
gtggaaggggaattaaaggaaatagcgagcgaacccctcgatacgcacctgttcaaccta
gagaattttgctgccctgcacggcattataggagacttagtggccagtgttcattcatct
gtgactccagaaatggctggagccaacgcagtgattaaagacatcacagcacaagaatcc
gctgacattattttccttattgatggatcaaacaacgtcggcgctgtcacttttgcagcc
tttcgtgattttcttgcaaattttcttgaaagactcccagttggagatgagcagatacac
attggggtggtgacgtatagcgatcgacccagaactgtgttctccttggacgaccacacc
aacaaagccgatgttctagatgccatgaaagcccttagcttcctcggtggcgaggaagct
aacatgggggaagcccttgagtacgtggtccaaacccacttcactaagtcaggaggcagc
agggtagaggaaggggtaccgcaggttttagtgttgataagtggcagcgagtctagcgat
gacattagagagggagtcttagccatcaaaagagcgagtgtattcacattttgcattggg
gtccaaaatgctgaccaagtagagcttcagcacattgctactgatggaagcttcgtattc
attgccttggacacacgtaaccttgacgaacttcaagaactcttactaccaaacattgcg
ggagtggcccaaaggctcattttgttagatgccccaaccgttcttacagaagttactgaa
gccaatcagaaggacatagtcttcctgatagatggcacaacaatacagggcaatgcccct
tttaatggaattcgtgagttcctttccaaagtcatcaacagactggaagttggagcggat
aagatccaagtctcagtggcacaatattcagataccgtaagaacagacatctctttcagc
actccccaggacaaaaatgccatcgttagcagcatcaggaaactaaaaccacttggcggt
agtgtgcacaatacaggctctgcactgaggtatgttaaagacaacttattcaccagcgcc
gcaggatgcaggatcgatgaaggtgtcctacccctcctggtccttgttactggtggtaaa
tccagagatgatgtcgccctaccagcacaagaattgaaaggtagaggcatattggccatt
gctgtgggagctgtgaatgcagatcgtgccgaactggaacaagttgccttcagtccaacc
ctggtattcactaccagtgatttccgcccagctaccatgctgcctcgtatccctgacatc
ctgactaatatacggacactgtctggaactgttgtggaaacgacaacaacagaagttctg
gcaaacaaaagggatatcatctttcttttggatggatcagccaacgttggaaatgccaac
ttcccatttgtccgcgacctcgttgtgagcctagttaggttccttgaggtcggaattgac
gatgtacgagtcggcctacaagacatgattaggccgctaatgacatacgttagtggtgac
gtggaagaagtcaccatcccgtctgcagaaagcaagaaagatatcttattcttgaccgat
ggctcagcataccttggaggtcagtttcctgccgttcgagaatttctgctccgtgttatt
tctgacctggacgtgaagccagaaggcacccgtgtggctgtggcacaattcagtgacaac
gcacaactcgagttcaactttgaagagatcccgtctaaggaaaacatccttcagaaagtg
agaaaaatgagggtaaagtcagggcgactcctcaacatcggtgctgcgttagaatacgcc
ctgagggacatcttcgtgaggaacgctgggagcaggattgaggaaggagtgccacaattc
cttgttctcctggctgccggaaggtcaagcgacaatgtggaatcggcagccaacgccctg
aaacgagcgaacgtcgtccctttcgtcatcagagccaggagtgcagatgctgctgaatta
gaaaagatcgtttatgaccctaatttcatcctacaagccgatgacctggttagaattggg
gacattcggcctaaaatagtcaacctactgaaaaccgttgaactcgcaccaagagtggtt
gaagttcagaagaaggatgttgtgtttctgctggacggttcggatggcatcagacgtagt
ttcccttcactggtgtcctttgtggaaaacatcgttcgaagcctggacgtaggccctgat
gacattcgggttgctgtagcccaatatagcaatgttcccaaagtggagttcctcctgaat
gtccacccagacaagaccgctgtgatcaatgcagtccggcgcttgtctcccatggggggc
tcaccgctcaacacgggggctgcccttaattatcttgtacgcaacgtgttcaccagccag
agtgggagcagggtggccgaaggcgtccctcagttcttgatcctggtgaccgcagacaag
tccagagatgacgtcacgaggcccgccgcggctctgaagggcactggagctgtgcccttt
ggcattgtggatgggaaaagagacatcgtattccttattgatggctcccagtttgcagcc
cccgacttttcctccgtccgtgaatttattgagaggcttgtaaacaacctgaatgtggat
gctgatgccactcgggtcgctgtgattcagttcagcgaggatcccagagttgagtttctg
ctgaacgcgtactccaccaaagacgaggtgcagaacgcagtgcgggggctcagacccaaa
ggagggagacgtgtgaacgttggctctgccctagagtatgtgtcaaaaaatatatttaca
aggccttcgggaagccgtatagaagaaggggcgccacagtttttaatcctcctcttttct
cgcccgtctgatgacgaggtggaggaccctgccatcgaagtcaaacaaattggggtggcg
ccgctggctgttgcgagaaatgtggataccgaggaactggtgaaaatagctcttagtcct
gaatacgtcttccaagtgtcaacttaccgggatctacctagtttggaacagagattgctg
acccctgttacgacactcactacgcagcagatacagagactcataggcgatacacgtcct
cctccagatattgaccgtgacgcaaaggaccttgtcttcctgattgacagctctagtggt
gtcggggcagatggcgttgctcacattcgagatttcattctgcggtttgtccagcagttg
gatgtgggagaaaacaaagtgagaattggtttggtccagttcagcaacgatgtattccct
gagtactttttaagagactccaagtccaaaagtctcgcgcttaatgctgtacggcgcttg
cgattcagaggaggagcccccctgaatgttgggaaggcgctggactacgttgtgaagaat
ttctttgtgaagtctgcgggaagcaggcgagaagatggcgtccctcagcatttagttctc
cttcttggagggagatcccaggatgacgtcagcagaccgtccagtgtgatgcaggggttt
ggaataaaaagcctgggtgtgggagcaagaaatgcagatagcgccgaactgcaaaggatt
accggtgctcccagaactgcatttattgtcagagagtttacagacctcccaacaatagag
agaaagatctttgcatcgtttcagcaacttccagaaccaccaacagaacctgaagttcca
actggccctgcaggtaaaaaacaagcggacgtcgtgtttctgctggatagctccattaac
ttcggaagggacaatttccaacaagtcacggactttgtagcgggcatagttgatgccatt
tatgaagacagggattccatccaagtcggcttagtccagtacaactcagacgtgagcgac
gaattcttcctgaaggacttccccaacaaacagcagatcatagacgcgattgaaaaagta
gcctacaagggcggcagggtctccaacgctggagccgccatcaggcatgtccaagcaaag
cactttgtgaaggaggccggcagccgggctgagcagaaggtccctcagattgctttcatt
gtgaccggtggccgaccggatgacgatgcgtatgcggctgcctcggcgctggcacggacg
ggaacaaaggtgtttgcagtcggggtgaagaacattgacctgggggaagtcgcccagctc
tccagcgacggcaccacggcgttccggtctgcgacgactgctgccatgtccgacttgaat
gaggccgtcttggtcacgatggccgatgtcatgaaacagcagctgtgtcaagtagggggg
gaagtctcaagagactgctatctggacattatacttggatttgatgtctccgatgttggg
ccgcagcagagtatattcactgcgcagagggtgcttgagacaaaggtggaggacattcta
aacaggattactcagatacagaggattagctgcactcccaaccagaccccttcggtgcgc
gtggctcttctggcccagactccctctggagtagtggaggcatttgacttttccgagtat
cagccagagttgtttgaaaagttccaggccatgcacaaccgtggtccgtttgttctaaat
gctgagactctcaaatcttatcagaataaatttgcgacatctcccactggaaacgtgaag
gtggtgatacacttgactgacggcattgatggctccagggaacagttaaaggctgcgact
gctgatctgaagagagaaggggtcaaggctttcattcttgttgggctggaacgagtatca
gactttgaggatgtgatgcagctggagtttggacgcggtttcacttacaatcggcctctc
cgggttaatctgcaggatctagatttcgagctggcagagcaactggacaatgttgcagaa
agagcgtgctgtggggttgcatgcaaatgttctggacagcgtggggacaggggattgccg
ggtacagctggaccaaagggagccccaggagaagatgggtacagaggctatccaggagat
gaaggaggaccgggagaccgcggacctctggggatcaacgggacccagggatttcaaggt
tgtcctggcgaaagaggagcgaagggcaatcgtggattcccaggagaaaagggtgaactg
ggagagatcggtctggatggaattgatggggaagaaggagacagaggccatccaggttct
cctggggagaggggaagccctggcagaagaggcgacaaaggaggcaaaggagaacaagga
gaacgaggagaccgtggactgcgaggaaactcgggcgcgccaggagcagatagcactcaa
agaggatccagaggccagaagggtgaacttggaccaatgggagatcctggagcggatgga
ccaccaggtgcctcaggaggacctggaagaaatggaggacagggcagaagaggaccccct
ggcatcaaaggaaacagagggcttccaggtccagcagggtctgtgggagaacagggtacc
agagggccacagggaccacctggccaggccggaactccaggtcttcgaggagagcaaggc
atacctgggccgaggggtggaggaggtccacctggggctggaggagaacgcggcaggctt
ggtccacttggtagaaagggtgagcctggtgaccctggtccgaaggggcccgctggtcct
gttgggccacgaggagagacgggagacgatggacgtgacggtgtaggccgggcaggaact
aaaggcagacggggagaaccagggtttccaggatacccggggccaaagggggcgcctgga
gaccgaggtggtattggcgattctggccccaaaggaaacagaggctacaggggaacccca
ggagagcctggcatacgaggtcaaaaaggagaaagaggatatggaggaccagctggacat
aagggagacagaggagaatcaagagaccaatgtgcccttgtgcgcaacatcaaagataaa
tgcccttgctgctatggcccgaaggaatgcccgatttatccaacagaattggcctttgct
atagatacttcttctggcgtaactgcggacattttcaacagaatgaggcaagcagttctg
gcgatcgttaatgacctcaccattgccgagagcaactgccctcgcggtgcccgtgttgct
ttggttacgtataacaatgaggtcaccacagagatgcgttttgctgactcccgcaagaag
gcccgtctcctgaaccagatcgaggccctccgagccatacagacaaccaagcagcgaagc
ctggagacggccatgtccttcgtcgccaggaatactttcaaacgggcacgcagtggcttc
ctcatgaggaaggtggcggtcttcttcagcaatggacccacaagacgatctccgcaactc
aatgaggccatgctgaagctctacgacgcgggggtcgtgcctgtcttcctcacgagcaga
gatgacccgatccttcggagtgcgctgcagtccaacaactctataggaggccaggtgatc
acgttttctggaggtccagctcaagtgaaccaaactattaggagtgtaataacctgccat
atttgcctggatgtatgcgatcctgaccccagctgcggcgcagcaaggcctgcctttggc
agagacaggcgagcagctgtgacggatgttgacatcgacatggctttcatcctggacagt
tcggagagcaccactcctctgcagttcagagagatgaagaagtacatcgcctacgtagtc
agccaactggagacgagctccgacccgaaggcatccctgcaccacgcccgggtcgccgtc
gtccagcacgctccatatgaatacgcgtccaattcaagcgcatcccctgtcagagtcgag
gtgtccctgacagattacagctccaaagacaagctgatggatttcattgggaaccagatg
gtgcaactgcagggcaccagggctgtggcgagcgccattgaacacaccataaggctcatt
tttgagcaggcgcctaatccccgggacctcaaagtcattgtgttgatgataacaggagag
gtgaacggccaggagctggagcgtcttcagaaagtggtagtggaagctaaatgcaaaggg
tacttctttgtcatcctcagcactggcaggcaggtgaacatccggagcatctacagcttg
gccagcgagcccaacgacgtcttcttcaaatacgcagacaagccatcagagtttcacgaa
gagcctctgctgcgctttggaaatctcttgccatctttcatcagcagtgaaaatgccttc
tacctgtctccagatgtcaggaaacaatgcgattggttccagggtgaccagcccgttaaa
agaattgcccagagacctgtaaacattccaaacaatgttactgctgcaccagctacaaca
aaaccaacaacaaaatcaaccacaacaaaagctacaacaacaaaaccaaccacaacaaaa
gctacaacaacaaaaccaacaacaacagaagctacggcaacaaaaccaacaatagaaaaa
ctggaagtggtgaagcacgtgggtgaagtccaggtcacggatatcactgaaaacagcgct
aagctgcgctgggtggaccccgagcctcaacacgccgctgtctatgatatcaccatcacc
ttggcacatgatgactctttagtcctgaagctcaacttaaccggcactgaacgagtcatt
ggtggccttgggagtggacagaagtaccacgtcctggtcacgggctacctcaatgcacag
gccagatcaacctacaaaggaacatttagcacaaaggccatgcccttgcccaagttgcct
tcacccgcagtagcccatctgatggtgaacactgagccactggaagaaccaataacagtt
gaaagtatttgcaacttgaaaaaagaagaagggacctgcaggaattttatcctaaaatgg
tattatgacacagtgacgaaaagttgtgctagattctggtacggtggctgtggtggaaat
gacaacagatttaatacacagaatgaatgtgaaatcacctgcttttcagctcgtgtcaat
tctggtgtcatgacaataggaacttaa
DBGET
integrated database retrieval system
