Gekko japonicus (Schlegel's Japanese gecko): 107116790
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Entry
107116790 CDS
T04299
Symbol
SUPT5H
Name
(RefSeq) SPT5 homolog, DSIF elongation factor subunit
KO
K15172
transcription elongation factor SPT5
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107116790 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107116790 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
gja03019
]
107116790 (SUPT5H)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107116790 (SUPT5H)
RNA polymerase I system
107116790 (SUPT5H)
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
107116790 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
107116790
NCBI-ProteinID:
XP_015274275
LinkDB
All DBs
Position
Un
AA seq
1086 aa
AA seq
DB search
MSDSEDSNFSEDESERSSEAEEVEENEAEERVSAVGSEKEEVEEEEEEEEEDEYDEEEEE
DDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVRAAPSGP
FPKRNQISLKMIPRIDFKRIEARESVKEWRSKQKKFKRPPQRLFDAEKIRSLGGDVASDG
DFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVMESTGKER
EHNFQPGDNVEVCEGELINLQGRILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGD
HVKVIAGHFEGDTGLIVRVEENFIILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEW
GELVQLDPQTVGVIVRLGRETFQVLNKHGKVVTVRHQAVNRKKDNRFAVALDSEQNNIHV
KDIVKVIDGPHSGREGEIRHLFQGFVFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVMN
VTIGGFAPMSPRINSPMHPSAGGQHGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTVGSKRPDGMTSAYGRTPMYGSQTPMYGSG
SRTPMYGSQTPLHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEFDYGFD
DEPTPSPQGYGGTPNPQTPGYPDPSSPQVNPPYNPQTPGTPAMYNTDQFSPYAVPSPQGS
YQPSPSPQSFHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPG
GYNPHTPGSGIEQSSSDWVTTDIQVIVRDTYLDSQVVGQTGVIRSVTGGMCSVYLKDSEK
VVSISSEHLEPVTPTKNNKVKVILGEDREAMGELLSIDGEDGIVRMDLEEQLKILNLRFL
GKLLEV
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagcgaggacagcaatttctccgaagatgagagcgagcgaagcagtgaagcc
gaagaggtcgaggaaaacgaggcggaagaacgcgtcagcgccgtaggcagcgagaaagaa
gaagtggaggaagaagaggaggaggaggaagaagacgagtatgacgaggaggaggaggaa
gacgacgacgatcggccggcaaagaaacccaggcacggaggcttcattttggacgaagcg
gatgtggacgatgagtacgaagacgaggaccaatgggaggatggggcggaggacatcctg
gagaaagaagagattgaagcgtccaacattgataacgtggttctggacgaggaccgctcc
ggggcgcggagactgcagaacttatggagggaccagcgagaggaagagttgggggagtac
tacatgaagaaatatgccaaatcctctgtgggagagacggtgtacggcggctccgacgag
ctctccgatgacatcacgcagcagcagttgcttcccggcgtcaaggatcccaatctttgg
acagtgaaatgtaagatcggagaggagcgggccacggccatcgccctgatgcggaagttc
atcgcctaccagttcactgacactcccttgcagatcaagtcggtcgtggctcccgagcat
gtgaagggctacatctatgtggaggcctacaagcagacccacgtgaagcaggccattgag
ggggtgggcaacctgcggatgggctactggaaccagcagatggtgcccatcaaggagatg
acggacgtgctgaaggtggtgaaggaggtgaccaacctgaagcccaagtcctgggtccgg
ctcaagaggggcatctacaaagacgacatcgctcaggtgagagccgctccctcggggccc
ttcccaaagcggaaccagatctcgttgaagatgatcccgcgcattgattttaaacgcatc
gaagcccgtgagagcgtgaaagagtggcgctcaaagcagaagaagttcaagcgccccccg
cagcgcctctttgacgccgagaagatccggtctctgggcggagacgtagcctccgacggg
gatttcctcatctttgaagggaatcgttacagccggaagggcttcctcttcaagagcttt
gccatgtctgctgtgatcacagaaggggtgaagcccaccctgtccgagctggagaagttc
gaagaccagccggaagggatcgacttggaggtggtcatggaaagcacaggtaaggagcgg
gagcacaacttccagcccggagacaacgtggaggtgtgcgaaggggagctgatcaacctg
cagggcaggatcctgagtgtggacgggaacaagatcaccatcatgccgaagcacgaggac
ctcaaggacatgttggagttccccgctcaggagctgcggaagtacttcaagatgggggac
cacgtgaaggtgatcgccggccacttcgagggggacacgggcctgattgtgcgcgtggag
gagaacttcatcatcctcttctcagacctcacgatgcacgagctcaaagtccttccccgg
gacctgcagctctgctcagagacggcctccggcgtggacgtgggcggccagcacgagtgg
ggggaactggtgcagctggacccccagacggtcggggtcatcgtccgcctggggcgggag
acgttccaggtcctcaacaagcacggcaaggtggtgacggtcaggcaccaggcggtgaac
cggaagaaggacaaccggttcgcggtggccctggactccgagcagaacaacatccacgtg
aaggacatcgtgaaagtgatagacgggccgcactcgggacgtgagggagagatccgtcac
ctcttccagggcttcgtttttctgcactgcaagaagctggtggagaacggaggcatgttt
gtctgcaaggcacgccacttggtcctggccggaggctcaaagccccgggatgtcatgaac
gtcaccatcggcgggttcgcacccatgagtcctcggatcaacagccccatgcaccccagt
gcaggaggtcaacacggtggctttggagggggcgggatgagccggggccgtgggcgcaga
gacaacgacctcattgggcagaccgtgcggatttcgcaagggccctacaaaggctatatc
ggtgtggtcaaggatgccacggagtccaccgcccgtgtggaactgcactccacctgccag
acgatctccgtggaccggcagcgtctcaccacagtcggctcgaagaggccggacggcatg
acctcagcctacgggcgcacccctatgtacggctctcagactcccatgtacggctccggg
tcccgcaccccaatgtacggctcgcagactccgttgcatgacggcaaccggactcctcac
tacggctctcagacgcccttgcacgacggcagccggacccccgcgcagagcggggcttgg
gaccccaataacccgaacaccccctccagagctgacgaagagtttgactacggctttgac
gacgagcccaccccgtctccgcaaggctatggggggacgcccaacccacagaccccgggc
tatcccgatccgtcttccccgcaggttaatccgccgtacaaccctcagacgcccggcacc
ccggccatgtacaacacagaccagttttctccgtacgccgtcccgtcccctcagggctcc
taccagcccagccccagccctcagagtttccatcaagtggcaccgagtcctgtaggctac
cagaacacccactcgccagccagctaccacccaacaccatcgcctatggcctaccaggca
agccccagcccgagccccgtgggctacagccccatgaccccgggggctccctctccgggc
ggctacaacccccacaccccgggctccggcatcgagcagagttccagcgactgggtcacc
acagacatccaggtcatcgtccgcgacacttacttggacagccaggtcgtggggcagacg
ggagtcatccgtagcgtgaccggtggaatgtgctccgtctacctgaaggacagtgagaag
gtggtcagcatctccagcgagcacctggagccggtcactccgaccaagaacaacaaggtc
aaggtcatcctgggagaggaccgagaggccatgggcgagctgctgagcatcgacggggag
gacggcatcgtccgcatggacttggaagaacagctcaagatcctcaacctccgcttcctc
ggcaagctgctggaggtgtag
DBGET
integrated database retrieval system
