Gekko japonicus (Schlegel's Japanese gecko): 107118842
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Entry
107118842 CDS
T04299
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04120
Ubiquitin mediated proteolysis
gja04137
Mitophagy - animal
gja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107118842
04120 Ubiquitin mediated proteolysis
107118842
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107118842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107118842
04121 Ubiquitin system [BR:
gja04121
]
107118842
03029 Mitochondrial biogenesis [BR:
gja03029
]
107118842
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107118842
Membrane trafficking [BR:
gja04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
107118842
Aggrephagy
Other aggrephagy associated proteins
107118842
Xenophagy
Other xenophagy associated proteins
107118842
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107118842
Mitochondrial biogenesis [BR:
gja03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
107118842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_12
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
107118842
NCBI-ProteinID:
XP_015276708
LinkDB
All DBs
Position
Un
AA seq
283 aa
AA seq
DB search
MATAIASSLIQQKRQACKSNSNCVLASKRCTGSSKDAHPLCERHILGILSKSCDLAQQSI
VHIVQNPREKDQKKVETENENVCGIPRSLGREDESLTRVDLNTNLLPSNSAGLAVVLDTA
NNSTSSLPDNSDTASYSNFYVYCKSSCQAVTHGKLRVRCKSCKQGTLTLARGPSCWEDVM
IPDRITGVCQSRNCNGEVAEFYFKCAAHPTSDSETSVALNLITTNTRRISCITCTDVRSP
VLVFQCIHRHVICLDCFHLYCVTMLNDRQFVHDPVLGYSLPCV
NT seq
850 nt
NT seq
+upstream
nt +downstream
nt
atggccacggccatcgctagctcactgatccagcagaagcggcaggcatgcaagtccaac
agcaactgcgtcttggcctccaagcgctgcaccggctccagcaaggatgcccaccccctc
tgtgagagacacatcctcggcatcttaagcaagagctgtgatttggcccagcaaagcatt
gttcatattgttcagaatccaagggaaaaggatcagaaaaaggttgagactgaaaatgaa
aatgtttgtgggattccaaggagccttggaagagaagatgaaagtctcactcgtgtggat
ctgaataccaatcttctgccttctaattcagctggacttgctgtggttttggatactgcg
aacaacagcacctcctctctacctgacaattcagatactgctagttacagcaatttctat
gtttactgtaaaagttcctgccaggctgttacacatggaaaactgcgggtccggtgcaaa
tcgtgcaagcaaggcacactgactttggcaaggggtccgtcttgctgggaagatgtcatg
attccagacagaataactggtgtttgccagtcccgaaactgtaatggggaagtagctgaa
ttctactttaaatgtgcagcacacccaacctctgacagtgagacatctgtggcactgaac
ctcattacaacaaatactcggcgcatctcatgtataacctgtacagatgttcggagtccc
gtattggtatttcagtgcatacatcgccatgtcatttgcctggactgctttcatttatac
tgtgtgactatgctgaatgatcgccagtttgtccatgatcctgtccttggctactccctg
ccttgtgtgg
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