Gekko japonicus (Schlegel's Japanese gecko): 107119648
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Entry
107119648 CDS
T04299
Symbol
THBS1
Name
(RefSeq) thrombospondin 1
KO
K16857
thrombospondin 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04115
p53 signaling pathway
gja04145
Phagosome
gja04148
Efferocytosis
gja04350
TGF-beta signaling pathway
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107119648 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107119648 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107119648 (THBS1)
04148 Efferocytosis
107119648 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
107119648 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107119648 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107119648 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107119648 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107119648 (THBS1)
Membrane trafficking [BR:
gja04131
]
Endocytosis
Phagocytosis
Opsonins
107119648 (THBS1)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107119648 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
EGF
Motif
Other DBs
NCBI-GeneID:
107119648
NCBI-ProteinID:
XP_015277677
LinkDB
All DBs
Position
Un
AA seq
1177 aa
AA seq
DB search
METSGVLFLLLMLGVGATNRIPESGGDDNSVFDLFELIGFSRKGAVRKAGGIHLAKGSET
SSPAYRIEDANRIPAVPDHKFQDILDSIQAEKGFILLANLRPMKKSPGTLLAVERKDNSG
YVFKLVLNGKAKTLDLSVFPKEGNQTLVSVEDVELPTWQWNNITLLVQEDQAQLYVGCEK
MVNAELEIPIQNIFTRDLASSARLRIAKGGVNDNFQGVLQNVRFVFGTTLEAILRNKGCK
SSTRTVIKLDNPMNGSSPAIRTNYIGHKTKDIQAICGFSCDELSNVFVELQSLRALVTTL
QDSVHKVIINNEVGSGPFQISPGACIHNKVVYQNTDEWTTDTCTTCTCQNSVVICHKVSC
PIMPCSNATVPDGECCPRCWPSDYAEDIWSPWSEWTTCSVTCGNGIQQRGRSCDSLNHRC
EGSSIQTRTCNMRECDKRFKQDGRWSHWSPWSSCSVTCGSGLITRIRLCNSPLPQMGGRQ
CEGEARETNSCQKVPCPINGNWGPWSPWDTCAVTCGGGIQKRSRLCNDPEPQFGGKDCIG
DAVDTQICNKRDCPIDGCLSNPCFAGAKCTSFPDGSWKCGACPAGYRGNGVVCKDIDECQ
EVPDACFVIGGVHRCENTEPGYNCLPCPSRFTGTQPFGRGVEHAIANKQVCKPRNPCTDG
THDCNKNAKCIYLGHFSDPMHRCECKPGYAGNGIICGEDPDLDGWPNENLPCIANATYHC
NKDNCPNLPNSGQEDYDKDGIGDACDDDDDNDNIPDDRDNCPFIYNPQQYDYDRDEVGDR
CDNCPYNHNPDQIDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDLDGVGDQC
DNCPMEHNPDQMDADSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA
CDHDDDNDGIPDDKDNCRLVANPDQLDSDGDGRGDACKDDFDKDNVLDIDDICPENVDIS
ETDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF
INTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWLDTPTKAQGYSGLSIKVVNSTTGPG
EHLRNALWHTGNTAGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVLMYEGKKIMA
DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcaggcgtcctctttctcctgctgatgctcggcgtgggcgccacaaaccga
atcccagaatctggaggagacgataacagtgtatttgatctatttgagctcattggcttt
tctcgcaagggagctgtgcgcaaggcaggagggatacatctggcaaagggatctgagacc
tccagccctgcctaccgtattgaagatgctaaccgtatcccagctgttccggaccacaaa
ttccaagacattcttgactctatccaagcagaaaagggcttcatcctattggctaatctt
cgcccaatgaagaagagtcctggcaccctgctagctgtggagcgcaaggacaactctggc
tatgtctttaagctggtgttgaatggcaaggcaaaaacattggacttgagtgtctttcct
aaggaaggcaatcagactttggtgtcggtggaagatgttgagctgcctacctggcaatgg
aacaatattacccttttagtgcaggaggatcaggcccagctctatgtgggatgtgagaag
atggtgaatgctgaactggaaatccctattcagaacatcttcaccagggacttggccagc
agtgccagactccgtattgccaaagggggagttaatgacaacttccagggggtgctacag
aatgtgcgatttgtgtttggaactaccctggaagccatcctgagaaacaagggctgtaaa
agctccaccaggacagttattaaactggacaatcctatgaatggctccagtccagctatc
cgcactaactacattggccacaaaacaaaggacatccaggcaatctgtgggttttcctgt
gatgaattaagcaatgtgtttgtagaattgcaaagtttgcgtgcactggttacaacactg
caagattcagtccacaaagtgattataaacaatgaagttggcagcggtccttttcagatt
agtcctggagcatgtatccataataaagttgtgtatcaaaacacagatgagtggaccaca
gatacatgcactacctgtacttgccagaactctgttgtcatctgccataaagtgtcttgc
cctatcatgccttgttccaatgccactgttcctgatggagaatgctgcccacgatgctgg
cccagtgactatgcggaggacatttggtctccgtggtctgaatggactacctgctccgtc
acctgtggcaatggcattcagcagagaggtcgctcttgtgatagtctcaaccatcgctgt
gaaggctcttccatacaaactcgtacctgcaatatgcgggaatgtgataagagattcaaa
caggatggtcgctggagtcattggtctccttggtcttcttgctctgttacttgtggatct
ggtttgatcactagaatccgtctctgcaactctccgcttcctcagatgggaggtagacag
tgtgagggagaggcaagagaaaccaactcttgccagaaagtaccttgcccaataaatgga
aactgggggccatggtcaccatgggacacctgtgcagtcacgtgtggagggggcattcag
aagcgtagtcgcctctgcaacgatcctgaaccacagtttggagggaaagactgtattggt
gatgctgtagacactcaaatctgcaacaagcgagattgcccaattgacgggtgcctatca
aacccttgctttgcgggagcaaaatgtactagtttcccagatggttcctggaaatgtggt
gcctgccctgcaggttatcgtggaaatggggttgtatgcaaagatattgacgagtgtcaa
gaggtccctgatgcctgctttgtcattggtggagtacacaggtgtgagaacactgagcca
ggatacaattgcctgccttgcccatcacgttttactggaactcagccctttggtcgaggt
gttgagcatgcaatagcaaacaagcaggtctgcaaaccaagaaacccatgcactgatggt
acacatgactgtaataagaatgcaaagtgcatttaccttggccactttagcgaccccatg
catcgctgtgaatgtaaacccggctatgctggtaatggtattatatgtggagaagaccca
gatttagatgggtggccaaatgagaaccttccctgcattgccaatgctacataccactgc
aataaggacaattgccccaaccttcccaattcaggacaggaggactatgataaggatgga
attggtgatgcttgtgatgacgatgatgataatgacaacattcctgatgacagggataat
tgcccattcatttacaacccacaacagtatgactatgatagggacgaagttggtgatcgc
tgtgataactgcccctacaatcacaacccagatcagatagacaccgataacaatggagaa
ggagatgcctgtgctgttgatattgatggagatggcattcttaatgaaagagacaactgc
cagtatgtgtacaatgtggatcagaaagatacagacttggatggtgttggagatcagtgt
gacaactgtcctatggaacacaatccagatcagatggatgctgactctgaccgcataggt
gataaatgtgatagcaaccaggacattgatgaagatggccatcaaaataacctagataat
tgtccctatgtgcccaatgccaaccaagctgaccatgataaagatggaaagggtgatgcc
tgtgaccatgatgatgataatgatgggatccctgatgacaaagataactgcagactggtt
gccaatccagatcaactggactctgatggggatggacgtggagatgcatgcaaagatgac
tttgacaaagataatgtgctagacattgatgacatctgccctgagaatgttgacatcagt
gagacagacttccgtcgatttcagatggttcccctggatcctaagggaacctcccaaaat
gatcccaactgggttgttcgtcaccaaggcaaagaactggttcagactgtcaactgtgat
cctggacttgcagttggtttcgatgaatttaatgctgttgacttcagtggcacattcttc
attaatacagaaagagatgatgactatgctggctttgtgtttggatatcagtccagtagt
cgcttttatgtagttatgtggaagcaggtcacacagtcttactggcttgatacaccaacc
aaagcccaaggatattctggcctttctatcaaagtagtcaactccactaccggtcctgga
gaacatcttcgtaatgcactgtggcatactggaaatacagctggacaggtgcgaactctg
tggcatgaccctcgtcacataggctggaaagatttcactgcctacagatggcgtctcagt
cacagaccaaagactggctacattagagtgttaatgtatgaagggaagaagatcatggca
gattcaggcccaatctatgacaaaacctatgctggcggtcggttaggattatttgtcttc
tctcaagaaatggtgttcttctctgatcttaaatatgaatgtagagatccctga
DBGET
integrated database retrieval system
