Gekko japonicus (Schlegel's Japanese gecko): 107123405
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Entry
107123405 CDS
T04299
Symbol
FANCM
Name
(RefSeq) Fanconi anemia complementation group M
KO
K10896
fanconi anemia group M protein
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107123405 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107123405 (FANCM)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
107123405 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
HHH_5
DUF1153
MRC1
Motif
Other DBs
NCBI-GeneID:
107123405
NCBI-ProteinID:
XP_015282137
LinkDB
All DBs
Position
Un
AA seq
1899 aa
AA seq
DB search
MAGLSMAERGYQVRAARAALEANTLLCLPTGLGKTLVAAVVLHNFYRWFPAGRAVFLAPT
KPLVAQQRDACARLLRLPRRAMAQMTGGTQVADRKELWQNRRVFFLTPQIMVNDLSRGMC
PAAEVKCLVIDEAHKALGNHAYCQVVKELCKYTQQFRILALSATPGSDTKAVQQVISNLL
ISHIELCSEDSPEIQPYSYERLVEKCVVPLGEELSEMRAAYIQVLEAFAGRLIRFRVLSQ
RDISALTKYQIILARDQFRKNPASCFSGVQQGIIEGDFALCISLYHGYELLLQMGMRSLY
IFLSGIMDGSKGMTRARNELRRNEEFMTLYSQLENMFAAAAAETLANGNKRSGKEKLKPF
IYSHPKLKKLEEVVVEHFKSWKEHKDQKPVESKPADTRVMIFSSFRDSVHEIAEMLSRHH
PVVRVMTFVGHSTGKSAKGFTQKEQLEVVKHFRAGGYNTLVSTCVGEEGLDIGEVDLIVC
FDAQKSPIRLVQRMGRTGRKRQGRIVVILSEGREERTYNQSQSNKRSLLKAISENKVLRL
YQHSPRMIPEGVNPKMHRMLITPQECERDTSPPSPTEGRAVSLQQKWLPGYTGAGAKQTD
ASESWYLTAEEFEVWNRSYRVKAEDGLKQPVMPPSSFETLEDGEKKTQAGEVRELSLTEW
RLWQNRPVPTHLVDHSDRCLNFISSMETIEQMRYEEGDCSYELRIQPYFHPEDVDASVLK
RSKSVLDSLAAPKASLSRKALGAASKADPCSSSQHLDAEGWPLFKAAPVHSTKRPPAPRA
EVEGHSKERGSPSGLLLLLDEDPGPEAWPEGSEDRGGMSASVARDSPRAVKGCKSGDGLS
VESDSGCFSEDNLPRPSSLFYLPALEKDSLALPVPCAGEDPSCGREALLSAARLLSQSPP
SLNQLFESEEASACADRYPPAKLATSPESQRPSVTSQSTSELPGFPKPSPVSNCVLEASV
GNNNDDLAWDEVFDSNDEVQIGTERRDSPVTSRDLAVSSLRRDAVGGREASCENPGGNRS
PGEEQGSGLLFRREHASTRSSLSEGKGRKRSGQRGLCSQASTPAEDPGTSQRQPSSECVT
DGLGDPVSSLLRHQDQALEAADDAGEGALPPEEPYDVSQELFSVNFDLGFSLQESEDEDA
EPAGPKEDNGSHIADGSPSNGTSARESPLPWSPSSLERPKVSTPAPSQNPNCGLTRTADV
IPGASPWTPAGDTLCRSPGPARCGFSTPKSGRMMNSPVSRGAKLNCFFGNRLGSPRGAVP
SKAGTETVKKPAAKPTDGIEGFASQGTGSGECKNRKSHDLISAEAGASSGSEDEVIFIGK
RKRNVLMSPNLDWSSDESTGCSRKANRTGAAESRKPGRGVKRQKHSDGNTIKNAAKQFLD
EEAELSDEGGVEVSSDEVDSEQDLMGSSLHQFLDDETQIMQDLNESEMQAVYLKSVRSPA
VSNRRGRTVPKPYNPAAIFSQVPEPDESYLEDSFCVREGEEEEEEVQPKGSSSDGEEICL
NFDLLEEESFADGGRKQYRTRRRRKLKEACAEKPQNAPPLRKKPSRVQILDDSSEDEGRA
SPEPLVGLPPNVEPGAASRLALPRALDSSLPRRIPTPKSRIQPPQESRARGLLALKASVA
EELDFRPPQDKGPGRSELLGRDLRSTLQPGESSELPAAPRPAPRLPPPGSPGKPAPLCIL
ADSREISSGPDVISALKALHGVKVQVCSLGSCDYIVSSRLAVERKCQAELLNGAQRSKAA
QRVQQLRSKFDRVCVILEKERARAGEAQKGFHRTKPYDGVLSAFIRAGIRVLFSSCQEET
AELLKELSLVEQRKNAAILVPTEVQGPRRDALQFYLSVPCVSYVTALALCHGFRSVKEVA
DSSPSELAARARLSQQKAEELHRYLRYGFDKQMLPERVT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctttcaatggcggagcggggctaccaggtgcgggcggcgcgggcggcgctg
gaggccaacacgctcctctgcctgcccaccggcctgggcaagacgctggtggccgccgtc
gtcctccacaacttctaccgctggttccccgccggccgcgccgtcttcctggcgcccacc
aagcccctcgtcgcccagcagcgcgacgcctgcgcccgcctcctccgcctgccccgccgc
gccatggcccagatgaccggaggtacccaagttgccgatcggaaagagctctggcagaac
aggagggtcttcttccttacccctcaaataatggttaatgatctttcccgtggaatgtgc
cctgcagcggaagtcaagtgtctggttatcgatgaggcccataaagcacttggaaatcat
gcctattgccaggttgtgaaggaattgtgcaaatacacccagcagttccgtatcctggct
ctgagtgccaccccgggaagcgacacgaaggctgtgcagcaagtgatttccaatctgttg
atttcacacattgaactctgttctgaagattcccctgaaattcagccttattcctatgaa
cgactggttgaaaaatgtgtggttccccttggggaagaactgtctgaaatgcgggctgct
tacatccaggtcctggaagctttcgctggccgtctgattcgattccgggttttgtcccaa
cgagatatttctgctcttacgaagtaccagataatcctagcaagagatcagttcaggaaa
aaccctgcctcctgcttctcgggggtgcagcaagggatcatagaaggcgattttgctctt
tgtattagtctgtatcacggttatgagctgctgctgcaaatggggatgcgctcgttgtat
atcttcttatctggaattatggacggatcgaaaggtatgactcgtgccagaaatgaacta
aggcgcaatgaagaattcatgacgttgtacagccagcttgaaaacatgtttgcggcggcg
gcggctgagactttggcgaatggcaacaagagatcaggaaaggaaaaattgaaaccgttc
atctatagtcacccaaagttaaagaaattagaagaggttgttgtagagcacttcaaatcc
tggaaggaacacaaagaccagaagcccgtcgaaagcaagccggccgataccagagtcatg
atcttctcctcgttccgtgacagcgttcatgaaatcgcggaaatgctgagtcggcaccac
ccggtcgtgagggtcatgacttttgtggggcattccacggggaagagcgcaaagggcttt
acgcagaaggagcagctcgaggtggtgaagcacttccgtgcaggcggctacaacacgttg
gtctccacgtgcgtaggagaagaagggttagacattggagaagttgacctcatcgtctgc
tttgatgctcagaaaagtccaattcgtcttgtccagcgaatgggtcgaactggacgcaag
cggcaaggccgaatcgttgtcatcctttcggaaggacgggaagaacggacttacaaccaa
agccagtcaaataaaagaagccttctcaaagccatttctgagaacaaagtgctccgcctt
taccagcacagcccacggatgatccccgaaggcgtaaaccccaagatgcacaggatgctg
atcacgccccaagaatgtgagcgagacacttccccacccagccccacagaggggagagcc
gtctccctccagcagaagtggcttcccggttacactggcgctggcgcaaagcaaaccgat
gcatctgaaagttggtatcttacagcagaagaatttgaagtgtggaatagatcgtataga
gtgaaagctgaggatggactcaaacaaccagtaatgcctccgtccagttttgaaacacta
gaagatggggagaagaaaacgcaagccggagaggtccgtgagctgtctctgaccgaatgg
agactctggcagaaccgtcctgtccctactcacttggtggatcactcggatcgctgcctc
aacttcattagcagtatggaaacgatagagcagatgagatacgaagagggggattgtagc
tacgaactgagaatccagccttattttcacccggaagatgtcgacgcctcagtcctgaag
aggagtaaaagtgttcttgattccttagcggctccaaaggcttccttgtcccgaaaagcc
ctgggggcagcctccaaggcggacccctgctcctcctcgcagcatctggatgcagaaggc
tggcctcttttcaaagcagcccccgtccattctactaagcggcccccagcaccaagggca
gaggtcgagggtcacagcaaagagaggggcagtccttcaggcctcctgctgctgctggac
gaagaccctggccctgaggcttggccagagggaagcgaggaccgtggcgggatgagtgca
agtgtcgcaagagactcgccacgggcggttaaaggctgcaaatcaggggacggcctcagt
gtcgagtccgactccggttgcttctcagaagacaacttgccgcgtccgtcttctctgttt
taccttcctgcactagagaaggactcgctcgcgctccccgtcccctgtgctggggaggac
ccctcttgcggaagagaggccctgctaagtgcagccaggcttctctcgcagtcccctccc
tctctgaaccaactctttgaatccgaggaagccagcgcgtgtgcggacaggtatcctccg
gcaaaactggcgacctccccggagtcccagaggccgtccgtgacatcccagagcacctct
gagctccccggcttcccaaaaccgtctcccgtgagtaactgtgttctcgaggcctctgtt
ggcaataataatgatgacctggcctgggatgaggttttcgatagcaatgatgaagtgcag
attggaactgaaagacgggattcgccagtgacctcacgtgatctggcagtgagctctctg
cgaagggatgcggtgggggggagagaggcctcctgtgaaaatccaggcggaaataggagc
cctggtgaagaacaagggtctggactgttgttccgaagggagcacgcttctacgaggagc
agtctatcggaggggaagggcaggaagcgctcagggcaacggggcttgtgcagccaagcc
agtactccggctgaagatccgggaacctctcagcggcagccttccagtgagtgtgtcaca
gacggtcttggagaccctgttagttcattattaagacatcaggaccaagctttggaagca
gctgatgatgcaggggaaggagctctgccgcccgaagagccgtatgacgtctctcaggag
ttgttctccgttaactttgaccttggattttctctccaagaatccgaggacgaagatgcg
gagccagcaggccccaaggaagataacgggagtcacatcgctgacggttctccgtccaac
ggcacgtcagcaagggaatctccgttgccctggagtcccagctctttggaaaggccgaag
gtttctacaccggcaccctcgcagaacccgaactgtggtctaacgaggactgcagatgtc
attccgggggcttctccttggactccagcaggagacacactgtgccgatcaccaggccct
gcgagatgtggattttctacccccaaaagcggacgaatgatgaactcccccgtatccaga
ggggccaagctgaactgcttctttggaaacaggctgggaagcccacggggggccgtccca
agcaaagcaggaaccgagactgttaaaaagcccgcggcaaagcccactgacggtatcgag
ggttttgcttcacaaggcactggaagtggggagtgcaaaaaccgaaagagccacgacctg
atttctgctgaagcgggagccagcagcgggagtgaagatgaagtcatttttatcgggaaa
aggaaaagaaatgttttgatgtcgccaaatctggactggtccagcgacgagagcacgggt
tgttcccggaaagccaacagaactggtgctgcagagagcaggaagccgggcagaggggtg
aagaggcagaagcactcggacggcaacacaatcaagaatgcggccaagcagttcctggat
gaagaggcggagctttctgacgagggcggagtggaggtttcttctgacgaggtggattcg
gagcaggacctgatgggctcctccctccatcagtttcttgatgacgagacgcagattatg
caagacttgaacgagtccgagatgcaggccgtttacctgaaatccgtgcgtagcccagcc
gtcagcaacaggcggggcaggacagtgccgaagccgtacaacccggcagccattttctca
caggtcccagagccggacgagagctacttagaggacagcttctgtgtccgggagggcgag
gaggaggaggaggaggtccaacccaaaggcagctcgagcgacggggaggagatctgcctc
aactttgacctgttagaggaggagagttttgcagacggggggaggaagcagtaccgtacc
cggcgcaggaggaagctgaaggaggcctgtgcagaaaagccccagaatgcgccacccctg
cggaagaagccctcccgagttcagattttggacgattctagtgaagacgaaggaagggcc
agtccggagccgctggtgggattgccgcccaacgtggaacccggggctgcttctcgctta
gccctgccaagggctttggacagctccctgccccgcaggattcccaccccaaagagccgg
atccagccgccccaggagagcagagcccggggactgctagccctgaaagcgtctgtggcc
gaagaactggacttccgccctcctcaggacaaaggcccgggcaggtctgaactgctcggt
cgggacctccgaagtacactccagccaggagagtcttcggagctgccggccgccccccgc
cccgctccacggctgcccccgccgggctccccggggaaaccagcgcccctctgcatcctg
gcggacagccgagagatctcctcggggcccgacgtgatctccgccctgaaggccctccac
ggcgtcaaggtccaggtgtgctcgctgggcagctgcgattacattgtcagcagccggctg
gcggtggagaggaagtgccaggcagagctgctgaacggggcacagcggagcaaggcggcc
cagcgggtgcagcagctgaggagcaagttcgaccgggtctgcgtgatcctcgagaaggag
agagcccgggcaggagaggcccagaaggggttccacagaaccaagccctacgacggcgtg
ctgtcggcgttcatccgggcggggatccgggtgctcttcagctcctgccaggaggagacg
gccgagctgctgaaggagctgtctctggtggagcagcgcaagaacgccgccatcctcgtg
cccacggaggtgcagggcccccggcgagacgccctccagttctacctgagcgtgccctgc
gtcagctacgtgacggccctggccctgtgccacggcttccgctctgtgaaggaggtggcg
gacagttctccgagcgagctggcggcccgggcccggctgagccagcagaaggccgaggag
ctccaccgctacctccgctacggcttcgacaagcagatgctgcccgagagggtcacgtga
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integrated database retrieval system
