Geobacillus genomosp. 3: M493_06155
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Entry
M493_06155 CDS
T02798
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gjf
Geobacillus genomosp. 3
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gjf03032
]
M493_06155
03400 DNA repair and recombination proteins [BR:
gjf03400
]
M493_06155
Enzymes [BR:
gjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M493_06155
DNA replication proteins [BR:
gjf03032
]
Prokaryotic type
DNA Topoisomerases
M493_06155
DNA repair and recombination proteins [BR:
gjf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M493_06155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Auto_anti-p27
Toprim_2
ATG19
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AGT31527
UniProt:
S5Z3F7
LinkDB
All DBs
Position
1104486..1106561
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDRGYALKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLANMLNLDIHSDCRVVFHEITKDAIKQ
SFQQPRSINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EIRQFQPQEYWTIQATFQKGDETFAASFYGVDGEKRELKTEADVKAVLARLNGSAFTVKT
VTKRERKRSPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRIAETAQQEAAAYIEAKFGAAYVNQEKRKEKKGTNAQDAHEAIRPTAAFRDPENVK
PYLTRDQFRLYKLIWERFIASQMTAAVLDTMSVELENNGVVFRASGSTVKFPGFMKVYIE
GTDDQTEEQNRLLPDLAEGETVESEAIDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
EEWIKVVDEFYREFEKRLKVAEKEMREVEIKDEPAGIDCEVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCREGEIVERSTKKKRIFYGCSRFPECDFVSWDKPLARPC
PKCGSLLVEKKLKKGVQVQCTACDYEEQPET
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttagttatcgtcgaatcgccaacgaaagcgaagacgatcgaacggtac
ttaggaaaaaaatatacggtcaaagcctcgatggggcacgttcgtgatctgccaaaaagc
cagatgggcgttgatatagaccgcggctacgcgctgaaatacattacgatccgtggcaaa
ggccaagtgattaaagagttgaaaacggcggccaaaaaggcgaaaaaagtgtttcttgcc
gccgacccggaccgggaaggggaggcgatcgcctggcatttggctaacatgcttaatctc
gatattcactccgattgccgcgttgtttttcatgaaattacaaaagacgccattaaacaa
tcgttccaacagccgcgctccatcaatatgaatcttgttgacgcccaacaggcgcggcgc
gtgctcgaccgtcttgtcggctataacatcagcccgctcttatggaaaaaagtgaaaaaa
gggttaagtgccggccgtgtccaatcagttgcactgcgtctgatcatcgaccgggaaaaa
gaaatccgtcagtttcagccgcaagagtattggacgattcaagcgacgtttcaaaaaggg
gacgagacgtttgcggcttcgttttacggggtggacggtgaaaagcgcgagttaaaaacg
gaagcggacgtcaaagcggtgctcgcccgcttgaacgggtctgcgtttaccgtgaaaacg
gtgacaaaacgggagcgaaaacgaagcccggtgccgccgtttacaacgtcgtcgctgcaa
caggaggcggcgcgcaagctgaatttccgcacaaaaaagacgatgatgatcgcccaacag
ctgtacgaggggatcgacctcggcagcgaggggacggtcgggttgatcacgtacatgcgc
accgattcgacgcgcatcgccgaaacggcgcagcaagaggcggcggcgtatattgaggcc
aaattcggtgccgcgtacgtcaatcaagagaagcgaaaagagaagaaaggcacgaacgct
caggatgcccacgaggcgatccgcccgacagcggcgtttcgcgacccggagaacgtgaag
ccgtatttgacgcgcgaccaattccggttgtataaactcatttgggaacggtttatcgcc
agtcaaatgacggcggccgtgcttgatacgatgagcgttgagctcgagaacaacggcgtc
gtattccgcgcgagcgggtcgacagtgaagtttccagggtttatgaaagtgtatattgaa
ggaacggacgatcaaacggaagagcaaaaccggctgcttccggatctagcggaaggggag
acagtcgaaagtgaggcgatcgacccaaagcaacatttcacccaaccgccgccgcgctat
acggaagcgcgcctcgtcaaaacgttagaggagctcggcatcggccgcccgtcgacctat
gccccgacgcttgatacaattcaaaaacgcaactacgtagtgcttgagaacaagcggttc
gtcccaacggaacttggggaaatcgtcgtcgaattgatgcttgagtttttcccggaaatc
attgacgttgagtttaccgcgaagatggaaaaagagttagacgaaattgaagaagggaaa
gaggaatggatcaaagttgtcgatgaattttatcgcgagtttgagaaacggctgaaagtg
gcggaaaaagaaatgcgcgaagtagagattaaggatgagccggccggcatcgactgcgag
gtgtgcggcagcccgatggtgtacaaaatgggccgcttcggcaaatttatcgcctgctcc
aatttcccggaatgccgtcatacgaagccgatcgtcaaagaaatcggcgtcaaatgcccg
aaatgccgcgaaggggagattgtcgagcgcagcacaaagaaaaagcgaatcttttacggt
tgcagtcgtttcccggagtgcgatttcgtctcgtgggataagccgcttgcccgtccatgc
ccgaaatgcggcagcctgctcgtcgagaaaaagctgaaaaaaggtgtgcaagtgcaatgc
acagcatgcgattatgaagaacagccggaaacgtaa
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