Geobacillus lituanicus: GLN3_06475
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Entry
GLN3_06475 CDS
T05193
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLN3_06475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_06475
Enzymes [BR:
gli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GLN3_06475
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GLN3_06475
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GLN3_06475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Zn-ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASS86801
LinkDB
All DBs
Position
complement(1289595..1290419)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETIRRTLLPLVAGKTIEEVRVFWPNIIRHPQDPAAFAARLAGQTVRGIDRRGK
FLKFLLDRDMLISHLRMEGRYAVAQSDEPLEPHTHIVFRFTDGSELRYRDVRKFGTMHVY
AKEEADCRPPLAQLGPEPLSPAFSPAVLAAKAAKTKRTVKALLLDQTVVAGFGNIYVDEA
LFRAGILPGRPAASLTDEELARLHEEMVATIGEAIMKGGSTVRTYVNTQGEAGTFQHHLF
VYGRKGEPCKRCGAPIEKMVVAGRGTHYCPRCQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtggaaacgatccgccgcacgctgttgccgcttgtcgctggc
aaaacgattgaagaggtgcgggtgttttggccgaatatcattcgtcatccgcaagacccg
gcggcgtttgctgccaggctggccgggcagacggtgcgcggcatcgatcggcgcgggaaa
tttttgaaatttttgcttgaccgggatatgctcatctcccatttgcgcatggaggggcgc
tacgcggtcgcccagtccgatgagccgcttgaaccgcatacgcacattgtgtttcgtttt
acagacggcagtgagcttcgttatcgcgatgtacgcaaattcggaaccatgcacgtgtac
gcgaaagaggaagcagactgccggccgccgctcgctcaattagggccggaaccgctgtcc
ccagcgttttctccggcggtgttggccgcaaaagcggcgaaaacaaagcggacggtgaaa
gcgttgttgcttgatcaaacggtcgtggccgggtttggcaacatttatgtcgacgaagcg
ctgtttcgcgccggcattctccctggacggccggctgcttcgctgacggatgaagaactt
gcacggttgcacgaagaaatggtggcgacgatcggcgaggcgatcatgaaagggggaagc
acggtgcgcacgtatgtgaatacgcaaggagaagccggaacgttccagcatcatctgttc
gtatacggccgcaaaggggagccgtgcaaacggtgcggcgccccgattgagaaaatggtt
gtcgccggccgcggcacgcattattgcccgcgttgccaacgctag
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