Glarea lozoyensis: GLAREA_00398
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Entry
GLAREA_00398 CDS
T04883
Name
(RefSeq) Sm-like ribonucleoprotein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_00398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_00398
03041 Spliceosome [BR:
glz03041
]
GLAREA_00398
03032 DNA replication proteins [BR:
glz03032
]
GLAREA_00398
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
GLAREA_00398
Spliceosome [BR:
glz03041
]
Complex A
U1 snRNP components
Sm proteins
GLAREA_00398
U2 snRNP components
GLAREA_00398
Complex B
U1 snRNP components
GLAREA_00398
U4/U6.U5 tri-snRNP components
GLAREA_00398
Complex C
U2 snRNP components
GLAREA_00398
DNA replication proteins [BR:
glz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
GLAREA_00398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Eap1
Motif
Other DBs
NCBI-GeneID:
19459456
NCBI-ProteinID:
XP_008083347
UniProt:
S3DS18
LinkDB
All DBs
Position
Unknown
AA seq
193 aa
AA seq
DB search
MANKQGKMAGLINYRMRVTMNDGRQMVGQMLAFDKHMNLVLADTEEFRRVKRKAPKSSTA
PGASSTSAPLVESEEKRTLGLTIVRGAHIISLSVESPPPADPAARLGASAPGGAASALSA
GAGIARPAGRGAAIGLAGPAAGGPPGGFGGFPGAPPFGRGGPPGFPPGGMPPGGGFAPPG
FGGPPPAFAPPRR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaacagggaaagatggccggtctcatcaactaccggatgagagttacaatg
aacgatggaagacaaatggttgggcaaatgcttgcgttcgacaagcacatgaatcttgtc
ctcgcggatactgaagagttcagacgcgtcaagcgcaaggcacccaaatcctccaccgcc
ccaggcgcaagctcaacctccgcaccgcttgtcgagtccgaagaaaaacgtacattaggt
ctcacaatagttcgaggcgcacatataatctctctatctgtcgaatctccacctccagca
gatccagcagcgcggttaggagctagtgcgccaggtggtgctgcatctgctctttccgca
ggtgctggtatcgcaagaccagcaggaagaggagctgccattgggctagctggtcctgct
gcaggcggtccaccaggagggtttggagggttccctggtgcccctccatttggtagaggc
ggaccaccaggtttcccaccaggaggtatgccaccaggaggaggattcgctcccccaggt
ttcggaggtcccccaccagcatttgccccaccaagaaggtga
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