Glarea lozoyensis: GLAREA_07813
Help
Entry
GLAREA_07813 CDS
T04883
Name
(RefSeq) WD40 repeat-like protein
KO
K15542
polyadenylation factor subunit 2
Organism
glz
Glarea lozoyensis
Pathway
glz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLAREA_07813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
glz03019
]
GLAREA_07813
Messenger RNA biogenesis [BR:
glz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GLAREA_07813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Eap1
MIOS_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
19466865
NCBI-ProteinID:
XP_008080691
UniProt:
S3D6B8
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAYEQRGERDFGGQGGGGGFEAGGGFGRGRGRRPITDYGSTMVHWMRNRQPRFKGGYQGE
MERPSASYIVDMLPPLARLHNPADSIPSKHLHSSLNKIKHPVNVVRWTPEGRRLLTASSS
GEFTLWNGTGFNFETIMQAHDVAIRALAYSHSDDWLVSADQDGIIKYWQPNFNNVKVIQG
HGDAIRALSFSPNDTKFVTASDDSFLKIFDFAGGVEEKAIRAHGWDSKTVDWHPTKGLIV
SGSKDHTVKLWDPRMDLTVYEPKDVVKPLAILRGHHNTITSTIFERVRGDCLATSARDNV
ARVFDLRMMRDILFIKGHEKEISTMTWHPIHSSLLSTGGGDGSMMHYLLDEPNNPPGVAP
TIAAYDATDPTTAPAQSIYPAHKIPYAHDFPIWSLDWHPLGHILASGSNDRVTRFWTRAR
PGETDSFNDRYHIGEAAAEAQGTWDRRGNRRQRQEEEEQEAEDEMEGLVDQKMPSKASGL
PGIPGLPGLTAGIQIPGMGSVIPPPPFANPGVPPPPPGMDLSNPPDFAQLAEMMKKAGIP
PPTANGQFPPPPPGMLPPGLLPPGGFQIPPGYMPPPNMTGGPPPPPPVQFTGGIPGMSVP
GLGTQSEAETASAASIRRRGPLPSQEESLQMEQRKGKYTRAR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgaacagcgtggtgagcgcgactttggagggcagggaggaggtggtgggttt
gaagccggcggtggttttggtcgcggtcgtggcagacgtccaattactgactatggctca
actatggtacactggatgcggaatcggcaacccaggtttaaaggagggtaccaaggagaa
atggagaggccaagcgccagctatattgtggatatgttacctcccttagctaggcttcac
aatccagcagactcaataccgtctaagcacctccattcgtcactaaacaagatcaagcat
ccagtcaatgtagtgcgttggacgccagaaggacgaagattactaacagcctccagtagc
ggagagtttactttatggaacggaactgggtttaactttgagacaatcatgcaggcacat
gatgtggctatccgagcattagcttactctcacagtgatgactggctagtatctgctgat
caagatggtatcatcaagtattggcaacctaatttcaacaacgtcaaagtcattcaagga
catggtgatgctattcgagctttgtcatttagtccaaatgatacaaagtttgtcaccgct
tctgatgattccttcttgaaaattttcgattttgctggaggggtcgaggagaaagctatc
agagcccatggatgggattctaagacagttgactggcatccaaccaagggactcatagtc
tcaggctcgaaagatcatactgtcaaattatgggatccacgtatggatctgacagtgtac
gagcccaaagatgtagtaaagcccttagcaatactccgtggccatcacaacactatcacc
agtaccatcttcgaacgggtcaggggagactgtctggcaacatcggcacgagacaatgta
gctcgggtatttgaccttcgaatgatgcgtgacatactattcatcaaaggccacgagaaa
gaaatctcgaccatgacctggcatccgatccactcgtctctgcttagtactggtggagga
gatggatcaatgatgcattatcttcttgatgaaccaaataatccacctggagtagctcca
acaatcgctgcctacgatgctacagacccaactaccgcaccagctcaatcaatatatcct
gctcacaagatcccatacgcccacgactttcctatctggtctctggactggcatccgctt
ggtcacatcctcgcatccggatccaacgaccgagttacccgtttctggacgcgcgctcgt
ccaggagaaacggattccttcaacgaccgctaccacattggtgaagccgcagccgaagcc
caaggaacctgggaccgtcgcggaaaccgtcgtcaacgacaagaagaagaagagcaggaa
gccgaagatgagatggaagggctcgtcgaccaaaagatgccatctaaggcctctggcttg
ccaggaattccaggtctcccaggccttactgctggaatccagattccaggtatgggaagt
gttattccaccacctcctttcgccaacccaggagtcccgcctcctccaccgggcatggat
ctaagcaacccacccgatttcgcacaattagccgagatgatgaagaaagctggaattccc
cctccgactgcgaacgggcagttcccacctccacccccaggaatgttaccacccggtctt
ctaccacccggcggtttccagatccctcctggatacatgccacctcccaatatgactggc
ggtccccctcctccgccaccagttcaatttactggtggaatacccgggatgagcgtccct
ggattggggacgcaaagtgaggcagagactgcttcggcggcgtctattagacggagaggt
ccgttgcctagtcaagaggagagtttgcagatggagcagaggaaggggaaatatactcgt
gcgagatag
DBGET
integrated database retrieval system