Glarea lozoyensis: GLAREA_10300
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Entry
GLAREA_10300 CDS
T04883
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
glz
Glarea lozoyensis
Pathway
glz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
glz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLAREA_10300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
glz03041
]
GLAREA_10300
03009 Ribosome biogenesis [BR:
glz03009
]
GLAREA_10300
Enzymes [BR:
glz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLAREA_10300
Spliceosome [BR:
glz03041
]
Complex A
U1 snRNP components
U1 related factors
GLAREA_10300
Complex B
GLAREA_10300
Ribosome biogenesis [BR:
glz03009
]
Eukaryotic type
Pre-60S particles
Helicases
GLAREA_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19469347
NCBI-ProteinID:
XP_008078541
UniProt:
S3DRH3
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MSYGGGYGGGGGRGGGGGYSNGYDNHGGRNNYSSGYSNGGGGGYGGGGGGGYGGGGGGGN
VNGYSGGGGGYGGGGGYGGGGAGGDRMSNLGAGLQKQSWDINAMPKFEKSFYKEDPLVTN
RSEADVAKFRKEHNIAVQGSDVPRPVETFDEAGFPAYVMSEVKAQGFPAPTAIQSQGWPM
ALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEI
TKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMLESGKTNLRRVTYLVL
DEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLQDFIQVNIGSLEL
SANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWP
ALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIH
RIGRTGRAGLKGTAITLFTTDNSKQARDLVSVLTEAKQNVDPKLAEMARYGGGGGGGRYG
GGGFRGGRGGGRGGGKLTLFFSPVPS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggaggatacggaggaggtggtggtcgcggtggcggcggaggctactct
aatgggtacgataatcatggtggtcgaaataactactccagtggatattccaacggagga
ggaggcggttacggaggaggtggtggggggggttacggtggaggagggggaggaggtaat
gtgaatggttactccggaggcggtggtggttatggaggaggtggaggatatggcggcggt
ggtgctggaggcgatcgcatgtctaacctcggtgctggtcttcagaaacaatcatgggac
atcaacgccatgccaaaattcgaaaagtcgttttacaaagaggaccccctggtcaccaac
cgatccgaggccgatgtcgctaaatttagaaaggagcacaacattgctgtccaaggctca
gatgtaccacgacctgttgagactttcgacgaagctggtttcccagcgtatgtcatgagc
gaggtcaaggcccaaggattcccagcaccaacagctattcaatcccagggttggcccatg
gctctctctggtcgtgacgtggttggtatcgcagagacaggttccggaaagactttaacc
tactgtctaccagctatcgttcacatcaatgcccagcctctgcttgccccaggagatgga
cccatcgttctcgtcttggccccaactcgtgagttggctgttcagattcagcaagaaatc
acaaaattcggtaaatcctcccgtatccgtaacacctgtgtctacggtggtgttccaaag
ggtggacaaattcgtgacctcgccaagggtgttgaggtctgtatcgccactccaggtcgt
ctcatcgacatgctcgagtccggcaagactaaccttcgtcgggtaacttaccttgttctt
gatgaggctgatcgtatgttggacatgggtttcgagccacaaatccgcaaaattctcgga
caaattcgaccagacagacaaacttgcatgtggtctgcaacatggccaaaggaagttcgt
gctcttgcttcagattacttacaagacttcattcaagtcaatattggttctcttgaacta
tccgctaaccacagaattacccaaatcgtcgaagtcgtctcagagtttgagaagagagac
aagatgaccaaacatctcgagaagatcatggaagataaagataacaagatcttgattttc
acaggtacaaagcgagttgctgatgacatcacacgcttccttagacaagatggatggcca
gcgctgtccatccacggtgacaaacaacaaaacgagcgtgattgggtcctgaatgagttc
aagaccggaaagagtcccatcatggttgccactgatgtggcttctcgtggtattgatgtc
cgcaacatcacccacgtgttgaactatgattacccaaataactcagaagactatattcat
cgtattggtcgtactggtcgtgccggtctcaagggtactgccattactctgttcacaact
gacaattccaagcaggctcgtgatctagtttctgttctcactgaggcaaagcagaatgtt
gatccaaaacttgcggagatggcacgctacggtggaggcggtggcggtggccgatatgga
ggaggtggtttccgtggagggcgtggtggtggtcgtggtggtggtaagcttactcttttc
ttttctcctgttccatcttag
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