Girardinichthys multiradiatus (darkedged splitfin): 124858033
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Entry
124858033 CDS
T08099
Name
(RefSeq) collagen alpha-1(XVIII) chain-like isoform X1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
124858033
NCBI-ProteinID:
XP_047205695
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Position
21:complement(34832499..34916807)
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AA seq
1265 aa
AA seq
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MTSRILPWFFGLSLLVLHLCCHHSSAYQLLGDRGSQSSLDLTELIGVPLPPSVSFVTGFE
GYPAYSFGPDANVGRLTKSFIPDPFHHDFAITVTAKPTTRHGGVLFAITDAYQSIVQLGV
ALSEVEDGAQNVILYYTDSETTSGSREAASFKMGDLTGRWARFTMTVQGAEIRLYMDCEE
YHKVAFSRSARPLTFEASSGIFVGNAGGTGLPRFVGSIQQLVLKSDPTAPNDQCEEDDPY
ASGFGSGDEDYEDSKEGDEVKKIVEERQYPMPSPELNLTESSPVRAPPTEVSLIDDEDGD
VEESSGQEVESSTVQAIIFRNNASEIQPDTPFQVSTGQKGEPGEPGPAGPPGPPGPPAQA
SGEGRDPGPRGPQGPRGPPGPTGLPGKDGEPGMKGEGGQPGATGFPGLQGEPGQKGEKGD
PGLGVPGPPGLPGPPGPPSKSSMEGSGLDDFDSDAEVVRGPPGPPGPPGLPGPPGPPTSA
AVPGPPGIPGKYGEKGGPGIPGVDGKDGDQGPAGKKGDKGEPGASGPAGPKGEQGPPGFP
GLPGSPGHEGQPGPRGPPGPPGPPGPSRIGLFEDLEGSGLLDDFGASTGPQGPPGIPGPP
GPKGKDGLEGPPGKQGQKGEPGVRGPPGLPGLNGEEGEEGAKGNKGDPGPKGERGQDGLS
VLGPPGPPGPPGPVINLQDLLLNATDGAFNFSGIFETRGPAGPKGPKGDFGLQGLQGPQG
IKGEKGEPGSLIAADGSLMSDLPGLLGTKGIKGDNGAPGNPGVHGPVGPPGPKGEIGFPG
RQGRPGLLGPKGEKGNSQGLPGPPGPPGPPGRPGIFSCPKGTVFPIPPRPHCKMPNVFKV
FPKYSCMLHVSSEKVKAQCQELTKLHPNGTIATGNCLQGPKGEKGERGRPGLPAPQSSFL
SRGGWGVKGDQGIKGEMGAKGEAGSPGQPGLPGRSGLVGPKGESVLGPPGRPGMPGPPGV
PGYGRPGAVGPPGPPGPPGQPGLPLRYGAALTITGPPGPPGPPGPPGASSNSPFLKTFST
RENMMQQTSRDQEGTLAYVRTTGSLFLKVPQGWKEIQLGGLIYLSNNIIPQDEPRAAYQV
RAKTLQRVRSVNERLNLVALNQPHSGNMMGHDMADQMCNNQAKAMGLAPNYRAFMSSHKQ
DLIRVVYPGFRDSLPVTNLRGDVMFRNWQSIFNGNGGPVNPRIPIYSFDGRDVLADPFWP
KKSIWHGSTSIGLRVDDKHCETWQADDFSVMGQSSSLTSGLLLGQQTRSCSTEYIVLCIE
TYKNS
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacgcattcttccctggttctttggattatctctcctcgttctccatttgtgc
tgccatcactcctctgcctatcagctgctgggtgaccgtggttctcaaagctcgttggac
ctgacagagttgatcggcgttccccttcccccctctgtctcctttgtcaccggattcgag
ggctacccggcctacagctttggcccagatgcaaacgtgggccgcctcaccaagtcattc
atcccagatccgttccatcatgactttgccatcacggtgacggcgaaaccaaccacacgg
cacggcggtgtgcttttcgccatcactgatgcatatcagagtattgtacagttaggtgta
gccttgtcagaggtggaggatggtgcccagaacgtcatattgtactacacggactcagaa
accacaagtgggtccagagaggcagcgtcattcaaaatgggagacctgacaggacgatgg
gcaaggtttaccatgacagtgcaaggtgcagagatccgtctctacatggactgtgaggaa
taccacaaagtggctttctccaggagtgccaggcctctaactttcgaggccagctcaggg
atcttcgtggggaatgccggtggaacaggccttcctcgctttgtgggttctattcagcag
ctggtgttgaagtcagatcccacagctccaaatgaccagtgtgaggaggacgatccttat
gcatctggttttggaagcggagatgaagattatgaagactcaaaggaaggagatgaagtt
aagaagattgtagaggagagacaataccccatgccttccccagagctgaatctcacagaa
agctccccagtccgagctcctcccactgaagtgtccctaattgatgatgaagatggagac
gttgaggagtcctctgggcaggaagtggagtcgagcacagtacaagctataatatttcgg
aacaatgcctctgagattcaacctgacactccctttcaggtgtctacaggacaaaaaggt
gaaccaggcgaacccggtccagctggtcctccgggaccccctggccctccagcacaagcg
tcaggtgagggaagggaccctggaccaagaggtcctcaaggcccacggggacctcctggc
ccaactggacttcctgggaaagatggcgagcctgggatgaaaggtgaaggtggtcagcca
ggagcaacaggattccctggactacaaggagaacctggtcagaaaggagagaaaggtgat
cctggcttgggcgtccctggtcctccagggcttcctggacctccgggtccacccagcaaa
tcttccatggaggggtctggacttgatgactttgacagtgatgcagaggttgtcaggggt
cccccagggcctccagggcccccaggactgcctggtccgccaggacccccaacttcagca
gcagttccagggcctcctgggattcctgggaaatatggagagaagggaggaccgggaatc
cctggagttgatggaaaagatggcgaccaagggcctgcaggaaagaaaggagacaaggga
gagcctggagcgagcgggccagcaggaccaaagggagaacagggcccaccagggtttcca
ggcttaccgggatcacctggccatgaggggcagcctggtcccaggggtccacctggacct
cctgggcccccaggaccctcaagaataggcttgtttgaggacctggaaggatctggtctg
ctagatgattttggagcctccactggtcctcagggcccgccaggaatccccggacctcca
ggacccaagggaaaagatggtttagaagggcccccaggaaagcagggccagaagggggag
ccaggtgttagaggaccgccggggctgcctggtctaaatggagaggaaggggaagaggga
gcaaagggaaacaaaggagatccaggaccaaagggagagcgtggtcaggatggtctcagt
gtgcttggtcctccaggaccacctggacctccaggaccagttatcaacctccaggatctt
ctgcttaatgctacagatggtgccttcaatttctcagggatttttgaaactcggggtcct
gctggaccaaaaggtccaaaaggtgactttggattgcaaggtttacaaggacctcaagga
ataaaaggtgaaaagggtgaacccggatctctcattgcagcagacggatccttaatgtca
gatctgcctggattattgggaaccaaaggaatcaagggagataacggtgctccggggaac
cctggagttcatggcccagttggaccaccaggacccaaaggagaaattggtttccctgga
cgacaaggtcgtccaggcttgctgggacctaaaggagagaaagggaactcgcagggcctg
ccgggccctcctggacctcccggacccccgggccggccaggaatattcagctgccccaaa
ggaacggtgttccccatccctcccagaccacactgcaaaatgcctaacgtcttcaaggtg
tttccaaaatattcctgcatgctgcatgtgagcagcgagaaggtgaaggctcagtgccaa
gagttgacaaagcttcatcccaacgggacaattgcaacaggtaactgcctccaaggtcca
aaaggagagaagggagaaaggggtcgtccagggttaccagctccccaaagttcatttctc
tccagaggaggctggggggtgaagggtgaccagggcatcaagggggagatgggagcaaaa
ggggaggcagggtctccaggacagccaggcttacctgggaggtccggactggtgggaccc
aaaggggagtcggtgctcggaccacctggccgcccagggatgcctggcccacctggtgtt
ccaggctatggcagacctggtgccgttggtcctcctggaccgccaggtcctccagggcaa
cctggactgcccctcagatatggtgcagctttgaccatcactggtccccctggacccccc
ggaccacctggaccccctggggcatcaagtaactcgccgtttctgaaaaccttttcgacc
cgagagaatatgatgcagcagacatcaagggatcaagaggggactctggcttatgtcaga
acaacggggagtctcttcctgaaggttccccagggctggaaggaaatacagcttggtggc
ctcatctacctctccaataacatcatcccccaagatgagcctcgagctgcgtatcaagtc
agagcaaagaccttgcaaagagtccgttcagtcaatgaaaggctaaacctggtagccttg
aatcagccgcactcagggaacatgatgggtcacgacatggccgaccagatgtgtaacaac
caggccaaagccatgggtctggctcccaactaccgtgccttcatgtcgtcccacaagcag
gacctgatccgtgttgtctaccctgggttccgggactctctaccagtaaccaacctcagg
ggagatgtgatgttcaggaactggcagtccatattcaacggcaacggagggccagtgaat
cccaggatacccatctactcctttgatggccgggacgttttagctgatcccttctggccc
aagaaaagcatctggcacggttccaccagtataggcctcagagtggacgacaaacactgc
gagacgtggcaagcagatgatttctcagtcatgggccagtcctccagcctgacctcaggt
ctgctccttggccagcagacgagaagctgttccaccgagtacattgtgctttgcatcgag
acctacaaaaactcttaa
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