Girardinichthys multiradiatus (darkedged splitfin): 124865863
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Entry
124865863 CDS
T08099
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124865863 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124865863 (ubr5)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124865863 (ubr5)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124865863 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
PABP
zf-UBR
Motif
Other DBs
NCBI-GeneID:
124865863
NCBI-ProteinID:
XP_047217305
LinkDB
All DBs
Position
3:20083541..20138409
Genome browser
AA seq
2845 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLSLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPEGSDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGGGSGGGAGGGGAGGGSSSGGGGGGSGGGGGGGGGGGGG
STSGRSSTAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKS
RSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHP
SVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERR
WLDGASFDTERGSTSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGALFSEL
VAVSSKGELYQWKWSEPEPYRNAQNPSIHHPRVSFLGLTNEKITLLAANSIRATVATESN
KVATWVDDTLSTVASKLEHSAQSFPELQGERMVSLHSCALYTCVQLENSLYWWGVVPFSQ
RKKMLEKARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVSAGIPKVGVL
LESVWNMNDSCRFQLRSPESLKSMEKTTKTQEIKMESKPELVKTEMGPPPSPASTCSDTS
SIASSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVK
FPGTSSSMTNQSTAPPPDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCI
PEKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSECNVA
IFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPPINSLGMGVHSLVNLPSNSTI
KKKAAVIIMAVEKQTLMQHVLRCDYEACRQYLMNLEQAFLLDQGSQGLGALLGHRCDGNR
NILHAAVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGS
SSSRGLRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDID
FILAPAVGSLTTASSGSNQGPSTSTIPGPSTETSVVESKDRKANAHLILKLMCDSVVLRP
HLWELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKIAKMGDPGMGDKDDADSMFMEM
ICPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHK
GHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEHILL
FLVQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWN
ALKSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITF
IDTLLGTLVKELQNKYTPGRREEAVAVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPI
GKCRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVE
PLPPRPSPDQSSSSSQTAASYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEG
VAGEEDHHDDQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNAS
GRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPLER
TTSASHANTAAQAPRSMQWAVRNTPSQRASGSGPSSSSTPAASSTGLIYIDPTNLRRSSA
ISSSAAAAAAALEASNTSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPAAV
KLSYQDAVSLQNYVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQH
SARRERMTAREEASLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMRSHNDEHSDVL
PVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTLQIDRKRNREILELGLDNEDSEHENDE
DTNQSSTLQDKDEDSVPSETGQNHPFFRRSDSMTFLGCIPPNPFDVPLAEAIPLADQPHL
LQPNARKEDLFGRPSQGLYSSSYMTTKGLAETSMDRNCLEILPTKMSYTANLKNVMSMEG
GQRNTENLTLGEQEMETSKAGPSPHDLAAQLKSSLLAEIGLTESDGPPLPSFRPQCSFMG
MMISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQS
RDLALEVDRDRDQLIQQTMRQLNAHFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYT
AIALALLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQRLRNRDRERERRSGGLRAG
SRRDRDRDSRRQLSIDTRPFRPSSEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASK
ITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLPEASEKAQQ
QDNRKRHGSTRSVVDMELDDPDDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGR
ILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQTGEADAV
FAAMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPHNVYEYVRKYAEHRMLVVAEQPLHAM
RKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENADKLLQFKRWF
WSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYV
PLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8538 nt
NT seq
+upstream
nt +downstream
nt
atgacatccattcacttcgttgttcacccgttgcccgggaccgaggatcagctcaatgac
aggcttcgcgaagtctctgagaaacttaacaaatacagctataacagtcatccacatctt
agtctgcttgagcaggccaccctaaagcagtgcgttgttggcccaaaccatgctggattt
ctcctggaggatggacgtgtgtgcagaatcagctttgctgttcagcctgatcgcctggag
ctcagtaaaccggaaggcagtgatggttcaaagttgagcagtggttcagggacaggaagg
agctccaggccaggcaggaccagtgatccaccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctccggggtaaatggagggagt
ggaggaggtggaagtggaggaggagcaggaggcggtggagcaggaggtggtagcagcagc
ggaggaggaggaggaggaagtggaggaggaggtggcggcggtggtggtggtggagggggg
agtacgtcaggcaggtcatcaacagcggctcgtgattcccggcgccagacaagagttatt
cgcacaggaagggaccgtggctcaggccttctgggtagccagccacagccagtcatacca
gcatctgtcattccggaagagcttattacgcaggcccaagtagtcctacaggggaaatca
agaagtgttattatcagggaactccagaggactaaccttgacgtcaacctcgctgtcaac
aacctgctgagccgtgatgatgaagatggagatgatggagatgacacagctagcgagtcc
tacctcccaggagaagacttgatgtccctgttggatgcagacattcactcagctcatcct
agcgtcattattgatgctgacgccatgttctccgaggacatcagctactttggctacccg
tcttttagacgctcctctctgtcacgactgggatcttccagagttctccttcttccccta
gagcgcgactcagagctgttgcgtgagcgtgagtctgtattgaggttacgtgagcgccgg
tggctcgatggggcttcgtttgacactgagcgaggttcgacaagccgcgagggtgagccc
agcctcgacaagaagagcatccctgtccagagtcccgtctcactgggggaggagctgcag
tggtggcctgacaaggacggtgtgaaatttgtgagcattggagccttgttctcagagctg
gtggctgtgagctccaaaggagagctttatcagtggaagtggagcgagcctgaaccctac
aggaatgcacagaatccttccattcatcaccctcgtgtttccttcctgggcctgaccaat
gagaagatcacgttactggctgctaatagtatcagagccactgtagcaacagagagcaac
aaggtggccacctgggtggatgacacactaagcacagtggcctctaagctggagcacagt
gcccaatctttccctgagctgcagggggaacgcatggtgtcgctgcactcttgtgcactt
tacacatgtgtgcagctggagaacagcctctactggtggggtgttgtgccttttagtcaa
aggaaaaaaatgcttgagaaggcaagagccaagaacaaaaagccaaagtctagtgctggt
atctcctcaatacccaacatcactgtgggaacacaggtgtgtttgaggaataatcccctc
taccatgccggtgcagtggccttttctgtcagtgccggaatccccaaagtgggcgtcctg
ttggagtctgtttggaacatgaacgacagctgcaggttccagctgcgctcaccagagagc
ctcaaaagcatggagaagaccacaaagacccaagaaatcaagatggaaagtaagcctgag
ctggtgaagactgagatgggtcctcctccatcccctgcatccacctgtagtgatacctct
tccattgctagcagtgcctcactgccctacaagcgcagacgttcaaccccggctcctaaa
gaagaagagaaggtgaatgaggagcagtggcctctcagggaggtggtctttgtggaagat
gttaaaaatgttcctgttggaaaggtgttgaaggtggacggtgcatacgttgctgtgaag
tttcctggaacatcaagtagcatgacaaaccaaagtactgctcctcctccggattctgat
ccgtcatcactgttacaggactgtaggctcctcagaatagatgagctacaggtggtcaaa
actggtgggactccaaaggttccggactgctttcagcgaacacctaaaaagctctgtatc
ccagagaaggctgaaattctggctgtaaatgttgactccaaaggagtccatgcagttcta
aagactggtaactgggtaaggtactgtatctttgatctggcaacaggcaaagctgagcag
gagaataactttcctacaagcaacctggcttttctagggcagagtgagtgcaatgtggcc
atctttactgcaggacaggagtctcccatcatcctccgggatgggaatgggacaatctat
cctatggccaaagactgtatgggaggaattcgggatcctgattggttggacctgcctcct
attaacagcttggggatgggggtgcactctctggtcaatttgccgtctaattccaccatt
aaaaagaaagctgctgttattattatggctgttgagaaacagaccctgatgcagcatgtc
ctgcgctgtgactacgaggcttgccggcagtatctgatgaacctggagcaggccttcctt
ctggatcagggcagccagggcctcggagcacttctgggccatcgatgtgatgggaaccgc
aacatcctccatgctgctgtctctgtctgctttcctgttagcaacaaagagaccaaagag
gaggaagaagctgaaaggtcagagagaaacacgtttgcagagcgtctgtctgctgtagaa
gcgatcgccaatgccatctctgtggtctcaagcaacagctccggaaacaggaccggctcc
tccagtagcagagggcttcgattaagggaaatgatgcggaggtctcttagagcagcaggt
cttggccgccatgagtccggtccatcatccagtgaccatcaggatcctgtctccccaccc
attgccccacccagttgggtcccagaccctccaccaatggaccctgatggtgacattgat
ttcattctagcaccagcagtgggttcactcaccacagcatcctcaggttctaaccagggt
cccagcacctccaccataccagggccatcaactgagacatctgtggtggagtctaaagac
aggaaggccaatgctcaccttatcctaaagctgatgtgtgatagtgttgttctgaggcca
catttatgggagctgctctctgcaaaggatgccagagggatgaccccattcatgctggct
gtcagtggaagagcctacccagctgctattactgtgcttgaggcagctcagaaaatagcc
aagatgggggatccaggaatgggagataaagacgatgctgattccatgttcatggaaatg
atttgcccttcgggaaccaacccagatgattccccactatatgtcctctgctgcaatgac
acctgcagtttcacttggactggagctgagcacattaaccaggacatatttgagtgtcga
acatgtggcctgcttgagtcgctctgctgctgcactgagtgtgcgagagtgtgtcacaaa
ggacatgactgcaagttgaaaaggacttctcctacagcttactgtgactgttgggagaaa
tgcaagtgcaaaacactgatagctggccagaaggctgctcgtctggacttgctctacagg
ctactaacaacaacaaacctggtcacgacaccaaacagcagaggagagcatatattactg
ttcctggttcaaactgttgccaggcaaagtgttgagcactgtcagtacaggccaccacgc
atcagagaagacaggaaccggaaggctgctaatgcagaagactccgatatgcctgaccat
gacctggaacctcctcgctttgctcagctggctctggagagagtgctacaggactggaat
gccctcaaatctatgattatgtttggttctcaggaaaacaaagatccacttagtgccagc
agcagaattgcccacctcctgcctgaagaacaggtctacttgaatcagcagagtggcacc
attcgcctcgactgtttcacacactgcctcattgttaaatgtgctcctgacatcactttc
atagacacgctactgggaactctggtcaaggagctgcagaacaagtatacaccaggcagg
agagaggaggcagtagctgttactagaaggtttctgcgctctgtcgctcgggtgtttgtt
atcctcagtgtagagatggcttcctccaaaaagaaaaacaacttcataccacagcccatt
gggaaatgccggcgtgttttccaggctctgctgccttacgctgtggaggagctgtgtaac
gttgcagagtcactgattgtcccggtgagaatgggaatagcaagacctacagctcctttt
actttggccagcaccagcatagatgcagttcaagggagcgaggagcttttctctgtggaa
ccgcttcctccgagaccatcaccggaccaatccagcagctccagccaaacagctgcttct
tacatcataaggaaccctcagcccagacggagcagccagtctcagcctgtcagaggacga
gatgaggagcaggatgacatcgtgtcagcagatgtggaagaggttgaagttgtagaggga
gtagctggggaggaagaccaccatgatgaccaggaggagcagggtgaggaaaatgctgaa
gctgaaggtcaacatgatgagcatgatgaagatggaagcgacatggagttggacttactg
gcagccgctgagacggagagcgacagtgaaagtaaccacagcaaccaagataatgctagt
ggtcgcagaagtgtcgtcacggcagcgactgctggctctgaagcaggtgccagcagtgtc
cctgccttcttttcagaggatgactcccaatcaaacgactcaagtgactcagacagcagc
agcagtcagagtgatgatgttgaccaggagacattcctcttggatgagccgctggaaagg
actacaagcgcctcccatgccaacactgcagcccaggctcctcgctccatgcagtgggcc
gttaggaataccccaagccaaagagctagcggaagcggcccctccagctcctcaacacct
gctgcaagctcaactggcttgatatacattgaccctacaaacctgcgccgctccagtgca
atcagctccagtgcagcggctgcggcagcagcgctcgaagccagtaacaccagtagctac
ctgacatcggccagcagtctcgcccgtgcctacagcatcgtcatcaggcagatatcagac
ctcatgagtctgattcctaagtataatcatcttgtctactcgcagtatcctgcagctgtc
aagctctcctaccaggatgcagtcagcctacagaattatgtagaagaaaagctgattccc
acctggaactggatggtgtccatcatggattccactgaggctcagttgcgctacggctcg
gctctgtcctcagctggagaccccggtcaccccagtcacccgcttcatgcctcacagcac
tcggctcgccgagaacgcatgaccgcccgggaggaggccagcctccgtactctggaagga
cggaggagagcagccacactgctgactgctcgtcagggcatgatgtccgcacggggagac
ttcctgaactacgccttgtctctgatgcgctcccacaatgacgagcattctgatgtgctt
ccggttctggatgtgtgctcgctgaaacacgtggcctatgtattccaggctcttatttac
tggataaaggctatgaatcagcagaccactttggacactttgcagatcgatagaaaaagg
aatcgagagattttggagctcggtttggacaatgaggattctgagcatgaaaatgatgag
gacaccaatcaaagttcaactcttcaagacaaggatgaagattcagttccatctgaaacg
ggtcagaatcaccctttcttccgccgctcggactccatgaccttcttgggctgcatccct
cccaacccttttgatgttcctctagcggaggccattccactggcagaccaaccccatctt
ctgcagccaaatgccagaaaagaggatctctttgggcgtccctctcagggcttgtactct
tcgtcttatatgacaaccaaaggcctggctgagacgagcatggataggaactgtttggag
atcctgcccacaaagatgtcctacaccgccaacctaaaaaatgtcatgagtatggaaggt
ggccagcgaaacactgagaacctgactctgggagagcaggagatggagacttcgaaagca
ggcccttcaccccatgacctcgctgcccagctgaagagcagcctacttgctgagatcgga
ctcacagagagtgacggtcctcctcttccatcattcagacctcagtgcagtttcatgggg
atgatgatttcacacgacatgttgcttggtcgctggcgcctgtcacttgaactctttggt
cgtgtcttcatggaggatgtaggcgctgagcctggatcgattctaacagagttgggcggc
tttgaggttaaagaatctaagttccgacgggagatggagaagttaaggaaccttcagtct
cgagacctcgccctggaagtggaccgtgaccgagaccagttaatacagcagaccatgcgt
cagctgaacgcacactttggcaggcgttgcacaaccacccccatggctgtgcaccgggtg
aaggtcaccttcaaagacgagcctggggagggcagcggcgtggcccgcagcttctacacg
gccatcgctctggcgctgctctccaacgacaagctgcccaacctggactgcgttcagagt
gtcagcaagggcatgcaggccagcagtacgtgtcatcacgattacaattcaaatctgatg
caacgattgagaaacagagatcgggaaagggagcggagaagtggagggcttcgagcggga
tctcggagagaccgagacagggattcaagaaggcagttgtcaatagataccaggccgttc
aggccttcctcagagggaaaccccagtgatgagcctgaccctctgcctgcacacagacag
gctctcggagaacggctatacccacgagtccatgcaatgcaacctgcatttgccagtaaa
attactggcatgttactggagctgtcacctgctcaactgctgctgctcctggctagcgag
gattccctgcgagccagggtagaagaagccatggagcttcttattgcacacggaagggaa
aatggtgcagacagcatcttggacctgggtcttcctgaagcttctgaaaaagcacagcag
caggataaccgtaagcgccatggttcaacacgcagtgttgttgacatggagctggacgac
ccagatgatggcgatgacaacgctcctcttttctaccagcccggcaaacgaggcttttac
tcccctcggccgggcaaaaataccgaggccagactcaactgcttcaggaatattggcaga
attctggggctctgcttgctgcagaatgaactctgtccaatcacactgaacagacacgtg
atcaaagtgttgctcggaagaaaggtgaattggcatgattttgcattctttgacccagtc
atgtatgagagcttgcggcagctgatccgccattcgcagacaggcgaagcagatgctgtg
tttgctgccatggatctggcttttgctattgacctctgcaaggaggaaggggctggacag
gttgagctcctgtcaggtggagtcaacatgccagtaactccacataatgtatacgagtat
gtgaggaaatatgcggagcacagaatgctggtggtggccgagcagcctctccatgcaatg
aggaaaggtttgctggatgttcttcctaaaaacgccctcgaggacctaacagccgaagac
ttcaggctgctggttaacggctgtggagaagtcaatgttcagatgctgatcagcttcact
tcattcaatgatgaatcaggggaaaatgcagataaactactccagtttaaacgatggttt
tggtccatagttgaaaagatgagtatgaccgagaggcaagatctggtgtacttctggacg
tccagcccctctctgccagccagcgaggagggcttccagccaatgccctccatcaccatt
cggcctccagacgaccagcacctccccacagccaatacctgcatctcgcgtctctacgtg
ccactctactcttcaaaacagatccttaaacagaaactcctgctagccattaagaccaag
aattttggttttgtgtag
DBGET
integrated database retrieval system
