Girardinichthys multiradiatus (darkedged splitfin): 124868417
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Entry
124868417 CDS
T08099
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
gmu04260
Cardiac muscle contraction
gmu04261
Adrenergic signaling in cardiomyocytes
gmu04270
Vascular smooth muscle contraction
gmu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124868417 (cacna1fb)
04020 Calcium signaling pathway
124868417 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124868417 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
124868417 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
124868417 (cacna1fb)
04270 Vascular smooth muscle contraction
124868417 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124868417 (cacna1fb)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124868417 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124868417
NCBI-ProteinID:
XP_047221623
LinkDB
All DBs
Position
1:complement(48903679..48959139)
Genome browser
AA seq
2087 aa
AA seq
DB search
MYEENSRSGARNGYTTSVDGEEGGGEEEEEEEEGGEADGGEGGRDEVEEKDAEWDEELDG
QNEGGVRMTRTDTLHSTTSSTGTQRRRGQHAKKQVQGSNQVQRAPRALFCLKLNNPIRRA
ALHIVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTIETFL
KILAYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSSGEQATTHHMPGKPGGL
DVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFI
GRMHRTCYYIRTDNFVEDDPVPCAFAGHGRQCIVNGSECRGRWDGPNGGITNFDNFFFAM
LTVFQCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKERE
KAKARGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNPRPSLGDLSDKKRKFGWF
SHSNDTHASLPASETASENTENIDEEHTNCCQACSARMMKISCCRMLRRWNRVCRRNCRT
AVKSVTFYWLVLLLVFLNTSLSASEHYDQPDWLTQVQDIANKVLLSLFTVEMLLKMYSLG
LAHYFVAFFNRFDCFVVCAGIIETILVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSN
LVASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTC
FQILTGEDWNVVMYDGIMAYGGPVFPGMIVCIYFVILFICGNYILLNVFLAIAVDNLAGG
DGDDKKKDKKKESEAEEEAEGEVKVDIDEDTEYEEEEELPEGEEEGGVQLKMADLAPPKE
KVLPIPEGSAFFCLSKTNPIRVGCHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSFR
NNILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSS
AISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQ
LFKGKFYRCTDEAKSTPEQCKGTFVVYKDGDVSHPMVRQRIWLNSDFNFDNVLMGMMALF
TVSTFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITF
REQGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNQVQYKFWSIINSTGFEYVMFVLI
LLNTVTLAVQHYEQSKTFSDVMDILNMVFTGLFTVEMLLKLLALRLRHYFVDAWNSFDAL
IVVGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLNKGEGIRTLLWTFIKSLQAL
PYVALLIAMIFFIYAVIGMQTFGKIAMQDYTQINRNNNFQTFPQAVLLLFRCATGEAWQE
IMLASLPGKRCDPESDHEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYL
TRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVAMLRRIQPPLGFGKLCPHRVACKR
LVAMNMPLNADGMVTFNATLFALVRTALKIKTEDNPEQENEELRAIIKKIWKRMKPKLLD
EVIPPHEEEEVTVGKFYATFLIQDYFRKFRKRKEKGNVTGESDSTNPSAVQLCKAGLKTL
QDLGPEMRLALNEDLEDEEEAMMEGEELENTEYKFLLSSVCLQAENGFGAEHRRGSIQTP
TGDVSSLIHRVGSLTKMANGNEHDERLRRGDSVRSSVSHHRRASVKNGLSDNAHKRPSYY
KYGRHIDRSNRTPRFLMLGREEEPREPRRDSGDRSWRNGDVEVYREQGYYSREEDNESIT
SRDRHYPDDSSLYRDHHDGHVPYTNGSYGDGYSEGRRTTRRRLLPATPTGRKPSFNIQCL
RRQGSSDDLPIPGTYHPTSPPRRARPQQAFNSYDSCRSSGRSSAAASTSWAKPCPRRGRL
LYAPLILVEEEGSPPWGGGLVGEGKNGGAGGAADGPPWYSGPTGTSAPPPYRAYTTLRVP
TQLGAPFAEKRGSADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAAS
DLLSSGSHDFLNTIADDPAALYSDEEPIRTSREEEELADEMACVTSF
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagaacagcagaagcggcgctcgcaatggctacaccacatcagtggatggg
gaggaggggggaggagaggaggaggaggaggaggaggagggaggagaggcggatggaggg
gaaggaggacgagatgaggtagaggagaaggatgcagagtgggacgaggagctggatgga
caaaatgaaggaggtgtgaggatgacgagaacagacacgcttcactccaccacgagttcc
actgggacacagagaagaagaggacaacatgctaagaaacaagtgcagggcagtaaccag
gtccagcgagccccacgggcgttgttctgtctgaagctcaacaacccaatcagacgtgcc
gcgcttcacatcgtcgagtggaaaccattcgatatcttcatcctcttagcgatctttgca
aactgcgtggctctaggagtttccaaaccatttcctgaagatgactccaactccaccaac
catgatctggaacaagtggagtatgtcttcctcatcatcttcaccatagagacctttctg
aagatcctggcctacggcctggtgatgcaccccagctcctacatccgcaatggctggaac
cttctggactttgttatcgtcattgtggggttattcagcgttgtcctggagacgatgact
cataagtcaagcggtgagcaggcgaccacccatcacatgccaggaaaacctggaggtctg
gatgtcaaagctctgagggcattcagggtgctgcgacccctgagactggtttctggagtc
cccagtctgcagatcgtcttgaactctatcatgaaggccatggttcctctacttcacatc
gctctgctggttctcttcgtcatcatcatctacgccattatcggcctggagctcttcatt
ggacgtatgcataggacctgttactacatcaggacagataatttcgtggaggatgatccg
gtgccgtgtgcatttgccggacacggccgtcagtgcattgtgaacggttctgagtgtcgg
gggaggtgggatggtcccaatggtggaatcaccaactttgataacttcttctttgccatg
ctgacggtgttccagtgcatcacaatggagggatggaccgatgttctgtactggatgaac
gatgccattggctttgagctgccgtgggtttacttcgtcagtctggtgatttttggctcc
ttctttgttctgaacctggttctgggagttctcagcggagagttcagtaaggagagggag
aaggcaaaggctcgaggagatttccagaagctccgggagaagcagcagatggaggaggat
ctatgcggatacatggactggatcacacaggcggaggacatggatgaactggatgaggac
ggaaacccaaggccgtccctgggggatctgtccgataagaagaggaagttcggatggttc
agtcactctaatgacactcacgcgagtcttccagcgagtgaaacggcttcagagaacacg
gagaacatagatgaagagcacaccaactgctgccaggcctgcagcgctcggatgatgaag
atcagctgctgccggatgttacgtcgctggaatcgagtctgtcgcagaaactgtcgcact
gctgtcaaatcagtgacgttctattggttggtccttctgttggtctttctcaacacctcc
cttagtgcatccgagcactacgatcagcctgactggttaactcaagtccaggacatagcc
aacaaggtgttgctgtctctctttacggtggagatgctgctgaagatgtacagtttgggt
ctggctcattactttgtggcgttcttcaaccgttttgactgctttgtggtgtgcgccggc
atcattgagaccatcctggtggagctggagatcatgcctcctttgggaatttccgtcctg
cggtgcgtccgtctgctgcggatcttcaaggtcacacgccactggacagctctgtccaac
ctggtagcgtctctgctgaactccatgaagtccatcgcctcactactgctcctcctcttc
ctcttcctgatcatcttcgctctgctgggcatgcagctgtttggagggaagttcaacttt
gatgagacgcagaccaaacgaagcacattcgacgccttcccacaggcactgctcacctgc
ttccagattctaacaggtgaggactggaatgtggtcatgtatgatggcatcatggcgtac
ggtggtcctgtgtttccagggatgatcgtctgcatttacttcgtcatcctcttcatctgt
ggcaactacatcctgctgaacgtattcttggccattgctgtcgacaatctggctggagga
gatggagatgacaagaagaaagataagaagaaggagagtgaggctgaggaggaggctgaa
ggagaagtgaaggtggatattgatgaagatactgagtatgaggaggaagaggagcttcct
gaaggagaagaagagggaggggtccagctgaagatggctgatcttgcacctcctaaagag
aaagttcttcccatcccagaaggcagcgccttcttctgcctcagcaaaacaaacccgatc
cgtgttggttgccacacgctcatccatcaccacatcttcaccaacctcatcctcgtattc
atcatcctcagcagctgctcattggctgccgaggatccaatcagagcacactccttcaga
aacaacattctgggttacgcagactacgcctttacgtccatcttcactgtggagattctg
cttaagatgactgtccatggagcgttcctccaccagggttctttttgcagaaactggttc
aacctgttggaccttctggtcgtcagtgtctcactcgtctccttcttcctgcactccagc
gccatctcggtggtgaagatccttcgagtcctcagggtgcttcgacctctgagagccatc
aatagagccaaaggactaaagcatgtggtccagtgtgtgtttgtggccatcaggaccatc
gggaatatcatgattgtcactacactgctgcagttcatgttcgcctgcatcggggtccag
ctctttaagggtaaattctaccgctgcacagatgaggccaaaagcactcctgaacagtgc
aaagggacctttgtggtctataaggatggagatgtgagccatcccatggtcagacagcgg
atctggctgaacagcgacttcaactttgacaacgtgctgatggggatgatggcactcttc
accgtgtctacctttgagggctggcctgcgctgctttacaaagccatcgacgctaacgga
gagaactctggtccaatctacaactacagagtggaaatttctatcttcttcatcgtctac
atcatcatcatcgccttcttcatgatgaacatctttgtcggttttgtcatcatcaccttc
agagagcaaggagagcaggagtacaagaattgtgagctggacaagaaccagcgtcagtgt
gtggagtacgccctgaaggctcagccgctgaaactctacatcccaaagaaccaggttcag
tacaagttctggtccatcatcaactcgacagggtttgagtacgtcatgttcgtcctgatc
ctgctcaacactgtcacgctggccgttcagcactacgaacagtccaagaccttcagcgat
gtcatggacatcctcaacatggtcttcactggactcttcacggtggagatgctgctgaag
ctgctggctctcagactgcggcactactttgtggacgcctggaactccttcgatgctctg
attgtggtcggcagtgtggtggacatcgtggtcactgagttcagcagtggcgaggacagc
tccagagtatctatcacctttttccgcctgttccgggtgatgcgattggtcaagctgctg
aataagggggaggggattcgtacgctgctctggacattcatcaaatcgctgcaggcgctg
ccgtatgtcgctctgctcatcgctatgatcttcttcatctacgctgtcatcggcatgcag
acgtttggaaagatagcgatgcaggattacactcagatcaatagaaacaacaacttccag
acgtttcctcaggctgttctcctcctcttcaggtgtgccacaggtgaggcgtggcaagag
atcatgttggccagtctcccaggtaaacgctgtgacccggagtcggaccacgaaccagga
gaagagttcagctgtggcagcaactttgccattgtttacttcatcagcttcttcatgctg
tgtgctttcctgatcatcaacttgtttgttgctgtcatcatggacaattttgactatctg
acgcgagattggtccatcctggggccacaccatctggatgaattcaagaggatctggtcg
gagtatgatccagaggctaaaggtcggatcaaacatctggatgtggtggctatgctccgg
aggattcagcctcctctgggatttgggaagctctgtcctcacagagtggcctgtaagcgc
ctggtggccatgaacatgcctctgaatgctgacgggatggtaacctttaacgccacgctg
ttcgctctggtccgcaccgcgctcaagattaaaacagaagataaccctgaacaggagaat
gaggaactgagggcgatcatcaagaagatctggaagaggatgaagccaaagctgctggat
gaagtcatacctcctcatgaagaggaggaagtcacagtcggaaagttttatgcaactttc
ctcattcaggattacttcaggaagtttaggaagaggaaagagaagggaaatgtaactgga
gagtccgactctacgaatccgtctgcggttcagctgtgtaaggctggtctcaagaccctg
caggatctgggtccagagatgcgtctggctctgaatgaagacttggaggatgaggaggag
gccatgatggagggtgaggagctggagaacactgaatataagtttctgctctcatctgtg
tgtctgcaggcggaaaatggattcggagcagaacatcgacgaggctccatacagacacca
actggtgatgttagcagtcttatccaccgagttggctctctcaccaagatggcgaatgga
aacgagcacgacgagcgtcttcgccgtggagacagtgtgaggtcatcagtcagtcatcat
cgccgagcgtccgtgaagaatggcctgtcagacaacgcccacaagagaccatcatactac
aaatacggaagacacattgaccggtcaaatagaacaccaaggtttctgatgctgggccgg
gaagaggagcccagagaaccgaggagagactctggagacagatcctggaggaatggagac
gtagaggtgtacagagagcagggttactacagtcgagaggaggacaacgagagcatcacc
tccagagacagacattaccctgacgactcctcgctgtacagagaccaccacgatggccac
gtcccatacactaacggtagctatggcgacggttacagcgagggcagaaggacgactcgt
agacgcttgcttcctgccacacccacaggtcggaaaccttccttcaacattcagtgtctg
aggcggcagggcagcagcgatgacctgccgattcctgggacgtaccacccgacatcccct
ccacgccgcgcacgacctcagcaggctttcaacagctacgactcctgtcgttcttccggg
cgctcctcggcagccgcctcaacgtcctgggcaaagccgtgtcctcgccgtgggcgcctc
ttgtacgctccactcatcctggtggaggaggagggcagccccccctggggaggaggactg
gtaggcgaggggaagaatggtggagcaggaggagcagcagacggaccaccctggtacagt
ggacccactgggacatcagctccgcccccgtacagggcgtacaccaccctaagagttccc
acacagcttggtgctccattcgcagagaaacgaggatcagctgacagtctggtggaagca
gttctgatctcagagggacttggcctctacgctcgagatccaaagtttgttgcattcgcg
aagcgtgagatcgcagatgcatgtcacatgacagtggacgaaatggaatcagccgccagc
gacctgctcagctctgggagccacgacttcttgaacaccatcgccgatgaccctgctgcg
ctctacagtgacgaggaaccaatcaggacaagccgcgaggaggaggagctggccgacgag
atggcctgtgtgacctcattctga
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integrated database retrieval system
