Glycine max (soybean): 100778678
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Entry
100778678 CDS
T01710
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100778678
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100778678
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
AAA_27
AAA_16
Motif
Other DBs
NCBI-GeneID:
100778678
NCBI-ProteinID:
XP_006606345
UniProt:
I1NHX5
LinkDB
All DBs
Position
20:43513067..43532035
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AA seq
1052 aa
AA seq
DB search
MAESRPPKRPKISRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSL
VCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKVEHITIMRKINTNNKSE
WLLNGNVVPKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL
PEQHRALVDKSRALKHIELSLEKNEGTLKQLKERNAELETDVERVRQRDELLAKAEAMKK
KLPWLRYDMKQAEYREAKERENDAAKALEEAAELLNDLKEPIMKQKEEKAALYAKCKKVS
NHASENAKKRTELMEEENKLDVELKGKYKEMEELRRQEETRQQKLVKAREEVAIAELELE
NLPLYVPPKDELQRLTAKIAELDYSAKQMRQKKSQAENEINHKKSSMNRIKERLIEMNNK
STKCLHALQRSGAEKIFEAYKWVQDHRHEFNKEVYGPVLLEVNVSNKDHAAYLEGQVAHY
TWKSFITQDSGDRDLLAKHLRFFDVNVLNYTGGDGPQREPFEISEDKRALGIYSRLDQIF
DAPIAVKEVLISQFNLDYSYIGSEKSDQNAGEVRKLGILDFWTPENHYHWSKSRYANYES
AVVNQVQRPQLLLNNLNVGEIEKLSSEQRELEEIVANLEESVKRFHDEERSLLNQSANLR
KQWEDISITVQNEQKKRQAIISRIDQKKKFLKLMEERDDLDTEIAKLVDQATKYNIRRFH
NAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIVEMEANLKQHEKFALQASLHFDNCKKE
SENCRQDLTDSLKYAKSIARLTPELKKEFLEMPTTIEDLEAAIQDTTSEANSILFVNHNI
LEQYEDRQQQIEDLAAKLEADKKESTRCLAELNNIKGKWLPTLRNLVAKINETFSFNFQE
MAVAGEVSLDERDMDFDQFGILIKVKFRENGQLQNLSAHHQSGGERSVSTIVYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN
VMNGPWIEQPSKVWTAGDRWSIITGLVGDTHC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcgcgcccccctaagcgccccaaaatctctaggggggatgatgattatatg
ccgggaaatattcttgagattgagctttgtaatttcatgacatttgattacttaaaatgc
aaacctgggcctcggttgaatcttgtaattgggcccaatggttctggtaaaagttcgctt
gtatgtgctattgctcttggcctctgtggagagccccagttgcttgggcgtgctacgagt
attggggcatatgtgaagcggggagaagaatctggctacattaagatcaccttgagaggg
gaccataaagtggaacacattaccattatgcgtaaaattaatactaataacaagtctgaa
tggttgctcaatggaaatgtggtgcctaaaaaggatgtggctgaaaccattcaaaggttt
aatatacaagtcaataatttgactcaatttttaccgcaagacagggtctgtgagtttgca
aagttaactcctgttcaacttctggaagagaccgaaaaggctgttggtgatccacagctt
ccagagcaacatcgagcattagttgataaaagtcgtgcattgaagcatattgagttgtct
ctggagaaaaatgaaggaactttaaaacagttgaaggaacggaatgctgaattagagacg
gatgttgaacgtgttcgtcaaagagacgaacttcttgccaaggctgaagcaatgaaaaag
aaattgccatggctgaggtatgatatgaagcaggcagaataccgggaagctaaggagcgt
gagaatgatgccgcaaaggcattggaggaagctgcagagttattaaatgatcttaaagaa
cccattatgaaacaaaaagaagagaaggctgcattatatgcaaaatgcaaaaaggttagc
aaccatgcaagtgagaatgcaaagaagcgaaccgaacttatggaggaggagaacaaattg
gatgtagaattaaaaggaaaatacaaagaaatggaagagttgaggaggcaggaagaaact
cgacaacaaaaacttgtaaaagctagggaggaagttgctattgctgaacttgaacttgag
aatctacccctttatgtacctcctaaggatgagcttcaaagactaacggccaaaattgcg
gaattggattattctgctaagcaaatgaggcagaagaagtcacaagcagaaaatgaaata
aaccataagaagtcatccatgaatcggattaaagaaaggttgattgaaatgaataataaa
agtacaaagtgtttgcatgcattgcaaagatcaggggctgaaaaaatttttgaagcttat
aaatgggtccaagatcatcggcatgaattcaataaggaggtttacggcccagttttatta
gaggtgaatgtctcaaataaggatcatgctgcatatctagagggtcaagtggctcattac
acttggaagtccttcataacacaagattctggtgatcgagatcttttggcgaaacaccta
cggttctttgatgtaaatgttctaaattatactggcggtgatggtccccaaagagagcct
tttgaaatttctgaagataagcgtgctcttggcatctactcccggctggatcaaattttt
gatgctcctattgctgtgaaggaggttttgattagccagtttaatctagattattcatat
attggatccgaaaaatctgatcagaatgctggtgaggtccggaaattgggaatcctagat
ttttggacacctgagaatcactaccattggtccaagtctagatatgcaaattatgaatct
gcagtcgttaatcaagtgcaacgcccacaacttttattgaataatttgaatgttggtgaa
attgagaagctgagttccgagcaaagggagcttgaagaaattgttgctaatttggaggaa
agtgttaaaaggtttcacgacgaagaaagaagcttactgaatcaatctgctaatcttcgt
aaacagtgggaggacattagtattacagtacagaatgagcaaaagaaacgtcaagcaatc
attagccgtattgatcaaaagaaaaagttcttgaaactgatggaggaacgggatgatcta
gatactgagatagcaaagcttgttgatcaggctacaaaatataacattcggcgtttccat
aatgcaatggaaattaaggatcttcttgttgaagctgtgagttacagacggatttttatt
gaacaacgtatggctttcattgaatttgatgcaaagattgtagaaatggaggccaatctg
aagcagcatgagaaatttgccctgcaagcatcattgcactttgataactgtaagaaagaa
tctgagaattgtagacaggatcttacagattccttgaagtatgctaaatcaattgctcgg
cttacacctgagctaaagaaggaatttcttgagatgcctactacaattgaggacctggaa
gcagctatccaagataccacttctgaagccaattcaatcctttttgtcaatcataacata
ttggaacaatatgaagatcgccaacaacagatagaagatcttgcagcgaaactggaagca
gacaaaaaggaatctacacggtgtttggctgaattaaataacattaagggaaaatggctt
ccaacattgagaaaccttgtggcaaagataaatgaaacattcagttttaatttccaagag
atggctgttgctggagaagtttcactagatgaacgtgatatggactttgatcaatttgga
atacttataaaagttaaattcagagaaaatggacagcttcaaaatctcagtgctcaccat
caatctggcggggaacgctcagtttcaactattgtttatcttgtttcccttcaagatctt
acaaactgcccatttagagtcgttgatgagatcaaccaagggatggacccaataaatgaa
aggaagatgttccagcaattagtgagagcagcaagcaagccaaatacaccccagtgtttc
cttcttaccccgaaattgttaccagatctgcaatatagtgaggcatgcagtatattgaat
gtgatgaatggcccttggattgagcaaccctcaaaggtctggactgctggtgatcgatgg
agtatcatcacgggacttgttggagacacccattgttaa
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