Glycine max (soybean): 100810448
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Entry
100810448 CDS
T01710
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100810448
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmx00535
]
100810448
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100810448
Meiosis-specific proteins
Cohesin complex and associated proteins
100810448
Proteoglycans [BR:
gmx00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100810448
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
APG6_N
Motif
Other DBs
NCBI-GeneID:
100810448
NCBI-ProteinID:
XP_003545540
UniProt:
I1M7D7
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All DBs
Position
14:3395289..3415556
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AA seq
1204 aa
AA seq
DB search
MYIKQVVIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGED
RQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGFKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMH
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLT
EIEDARTKVSDTSARKYNDVLDAHEKSKDLENTLKDVSKELQNFNKEKEVIEKRRTVALK
KHTELELDVKDLQEKISGNTRAKEDAARQLEILEKEIQDSTAELGKIIPLHEDQVQKEKD
IGKQIMEREKKLSILYQKQGRATQFSSKASRDKWLQKEIDDLERVLSSNKGQEQKLLDEI
DRLKEELQDCDENINRRKSEITTLESLIAQSREGLNRYKEERDKLHGERKSLWGKENELT
AEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICREYNISGVHGPIIELLNCDEKFFT
AVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKAPRITYPQSSDVIPL
LKKLNFKHDYTPAFSQVFARTVICKNLDVASRVARSDGLDCITLDGDQVSKKGSMTGGFY
DHRRSRLRFMNIIKQNADTIHIREEELEKVRFNLQEIDQKINEIVAEQQKSDAKCAHDKS
VIEQLKQDIANANKQKLLISKALAKKEKSVGDVQNQIEQLNASNAMKNAEMGTELIDHLT
PEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARRAELDTNLTTNLRRRKQELEAVISSV
DADSLVADAESKQQELSDAKILVDDATGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE
YERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLH
RCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIKELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHDDDEDEDGPREANPEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMIRRLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALEFIEHDQTH
NAAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggttgtgattgaaggttttaagagttatcgagagcaaattgccact
gagcctttcagttctaaagttaattgtgttgttggtgctaacggatctggaaagacaaac
tttttccatgccatccgttttgtgttaagtgatctctttcaaaacctacgcggtgaagat
aggcaggcactactccatgaaggagctggacatcaggttttatctgcgtttgtagagatt
gtgtttgacaattcagacaatcgtatcccggttgacaaggaggaagtgcgcttgcgccgg
actataggtttcaaaaaggatgagtattttctagatggcaagcacataacaaaaactgaa
gtgatgaatttactggagagtgctgggttctcccgatcaaatccttattatgttgtgcaa
caaggaaagatagcatcactaaccttgatgaaagactctgaacgacttgacttgctgaag
gaaataggtggtactagagtttatgaggagaggcgtcgtgaaagtttgaaaataatgcat
gaaactggtaataaaagaaagcaaataatccaagttgtacagtatctagatgaaaggttg
aaggaactagatgaagagaaggaggaacttagaaaatatcagcagcttgacaagcaaaga
aaatccttggaatatgctatttatagcaaagaagttcaagatgctcagcaaaaacttaca
gagatagaagatgctcggaccaaggtttctgacacatcagcaaggaagtataatgatgtt
cttgatgcacatgagaaatccaaagatttagagaatacattaaaagatgtatcgaaagaa
cttcaaaactttaacaaagagaaagaggttattgaaaagcgacgaacagtggcattaaag
aagcacacagagcttgagcttgatgtaaaagacttgcaagagaagatctctggaaatacc
cgagccaaagaagatgctgcaagacaactggagatacttgagaaagaaattcaagattca
actgctgaactgggcaaaattattcctttacatgaagatcaagttcagaaagaaaaagac
attggcaagcaaataatggagcgtgagaagaaactcagtatactttatcaaaaacaagga
cgtgcaacccagttttcaagtaaagcttctcgtgataagtggcttcaaaaggagattgat
gatcttgaacgagtgctttcttcaaacaagggccaggagcaaaagcttttggatgaaatt
gatcggcttaaagaagaactgcaggattgtgatgagaacataaacagacgtaaatcagaa
attactactttggaatctctcattgctcagtcacgtgaagggcttaatcgttacaaagaa
gagagagacaagttacatggggagagaaagtccctatggggcaaagagaatgaacttact
gctgaaattgataagctgagagctgaagttgagaaggctgaaaagagtcttgatcatgca
attcctggtgatgtgagaagagggttgaattcagttaggaagatctgcagggagtataac
atttctggagttcatggtccaattattgagttactgaattgtgatgaaaagtttttcact
gctgttgaagttactgcaggaaacagcttatttcatgtggttgttgaaaatgatgacaag
tcaacccagataattagacatcttaattcacagaaaggtggtcgagttacatttattcca
cttaacagagtaaaggctccacgtatcacttatccacagagttcggatgtcatacctctt
ttaaagaaattgaattttaaacatgactatactcctgcattcagtcaggtctttgctaga
acagttatctgcaagaatttggatgtggcttcaagggttgctcgttctgatggtctggac
tgcataactctggatggtgatcaagtaagcaagaaaggcagtatgactggaggattttat
gatcacagacgatcaagattgaggtttatgaatatcattaagcagaatgcagacactatt
cacattagagaggaggaattggagaaagttagatttaatctacaagagatagaccaaaag
attaatgaaattgttgctgaacagcagaagagtgatgccaaatgtgctcatgacaaatct
gtgatcgaacagcttaagcaggatattgctaatgctaataagcagaagctgttgatttct
aaagcacttgcaaaaaaggagaagtctgttggggatgtccagaatcaaattgaacagctt
aatgctagtaatgctatgaagaatgctgagatgggcactgagctcattgatcatttaaca
ccagaggaaaaaaagcttttgtcagatctgaaccctgaaatcaaagaccttaaagagaag
cttgttgcttgcaagactgatcgtattgagactgaagcacggagagcagagcttgatacc
aatctgaccactaaccttaggagaaggaaacaagagttggaggctgtaatatcatctgtg
gatgctgattctttggttgctgatgctgaatcaaaacagcaggaacttagtgatgctaaa
atattggttgatgatgcaacagggcagcttagaagtgttactgaaagtataaatgaccga
acacggcaaattaaaaagatcaaagatgaattgaataaattgaagtctttggaggacgag
tatgaaaggaaacttcaggaagatgcaaaagaattagagcaattgcagagtaaaaaaaat
acatatgctgctaaagaagaggaatatgccaagaaaataagggaactggggccattgaca
tcagatgcttttgaggcgtatagacgaaggaatattaaagatttgcacaaaatgctgcac
aggtgcaacgagcaattgcagcaattcagtcatgtaaacaagaaagcacttgaccagtat
ataaattttacagaacaacgagaagaacttcagaaaagacaggctgaacttgatgcagga
gatgagaaaattaaggagctgatatcagtgctagatcaacgtaaggatgagtcaatagaa
cgcactttcaaaggtgttgctaggcattttcgggaagtattttccgaacttgtgcagggg
gggcatggtcatctggttatgatgaaaaagaaggatggtgatcatgatgatgatgaagat
gaggatggtcctcgtgaagcaaatccagaggggagagtagaaaagtacattggagtgaaa
gtgaaggtctcatttactggacaaggggagacacagtccatgaagcagttgtccgggggc
caaaaaactgttgtcgcccttacacttatctttgccatacagcgatgtgatccggctccc
ttttatctatttgatgagattgatgcagcgctggatccacagtaccgaactgctgttgga
aatatgattcgtcgcttagcagacatagcaaacactcaatttatcactacgactttccgc
ccagagctagtgaaagttgctgataagatatatggagtaacacataaaaacagggtcagc
cgtgttaatgttgtatctaaggaagatgctctggaatttattgagcatgaccagacgcac
aatgctgctgaataa
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