Glaciecola nitratireducens: GNIT_3081
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Entry
GNIT_3081 CDS
T01632
Name
(GenBank) ATP dependent DNA ligase
Organism
gni
Glaciecola nitratireducens
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
AEP31176
UniProt:
G4QIM1
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Position
3424998..3426623
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AA seq
541 aa
AA seq
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MDAFSRLVDQLYFTSSNLAKSAILRDYLRTTPNPDRGWAIAAIAGTLNFDLFKRKLIKDL
ITARVDPVLFDLSYDYVGEMSETVAHLWPSTGEATKELSKNVSLPSLHELVVLFKQSNKQ
QVEEILVSLLDRMTAPQRWALIKLGTRGLRIGLSARFLKKVLAEYANELPQNNISTEDIE
RVWHGVEPPYLDLFDWLEGKADKPDVSKKITFQPVMLSHPLSDNELTIISSEHWQAEWKY
DGIRVQLVCNENGKALFSRTGDDISGSFPDLLDSIDETRVSGVFDGELLAMQDEQINSFN
QLQQRLNKKKPSKKLMQEIPVGMMLYDALVINGSDLREKALRIRSSQLTAWYELQSNRLL
KLSVPLVFNNIEELRALREKANISDNGYIEGLMLKNKDSIYVAGRPKGQWYKWKRDAKLV
DAVIMYAQRGHGKRSSFYSDYTFGCWQDDKLFPIGKAYSGFTDDELKQLDKWIRNNTIGR
FGPVKEVKKELVFEVAFDSVHHSKSHKSGVALRFPRIHRIRWDKPASEADQLTTLVSLIE
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttttcgaggcttgttgatcaactctactttacctctagcaacttagctaaa
tcagctattttgcgcgactacttgcgcacaacgccaaatccagatagaggttgggcgata
gccgctattgccggcactctcaattttgatttattcaagcgaaaactcataaaggatttg
ataaccgctcgcgttgatcccgtattgttcgatttatcatatgattatgtgggtgaaatg
agtgaaaccgttgcccacttgtggccaagcactggcgaagcaacgaaagagctttcaaaa
aatgtatcattacccagtttgcatgagctcgtcgtgctttttaaacaaagcaacaagcag
caagtagaagagatcttggtaagcctactagaccgaatgaccgccccgcagcgctgggcc
ttaattaagttaggcacacgcggtttacgtatcggtttatcagcccgattcctaaagaaa
gtattggcggaatacgccaacgaattaccgcaaaataatataagcaccgaagatattgaa
cgagtatggcatggcgtggaaccaccctatctcgacttgtttgactggttggagggtaaa
gcggataaacccgatgtatcaaaaaagattacgtttcagccggtcatgctctcccacccg
ctaagtgacaacgaactcacaattatttcatcagagcattggcaagccgagtggaaatat
gacggaatacgtgtgcagttagtctgcaatgaaaacggtaaagccttgtttagccgcaca
ggcgacgatattagcggcagttttcctgaccttctcgatagtattgatgagacgcgtgta
tctggcgtatttgatggcgagctactagcgatgcaagacgagcagattaatagcttcaac
caacttcagcagcgtttgaataaaaagaagcctagcaaaaaattgatgcaagaaattccc
gttggaatgatgctttatgatgccttagtcattaacggtagcgacctaagagaaaaagca
ttgcgaatacgcagctcgcaattaacagcttggtatgaactacaatcaaatagactcttg
aagctttccgtccctctagtttttaacaatattgaagaacttcgagcccttcgtgaaaaa
gctaatatctctgacaacggctacattgaggggctcatgctaaagaataaagacagtatt
tatgtcgcaggcagacccaaaggtcaatggtacaaatggaagcgagatgcgaagctagtg
gacgccgttatcatgtatgcacagagaggacacggcaaacgatcttctttctattctgac
tacacctttggttgctggcaggatgataagttattccccataggaaaggcctatagtggt
tttactgatgatgagttgaagcaactcgataaatggataaggaacaataccattggacgt
tttgggccggtgaaagaggtaaaaaaggaattggtttttgaagtcgcgttcgactctgtt
caccattctaaaagtcataagtcgggcgttgcacttcgctttcctagaattcatcgaata
aggtgggacaaaccagcaagtgaggctgaccaactaaccactctagtatcgctgattgag
aagtag
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