Geomonas nitrogeniifigens: KP003_01295
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Entry
KP003_01295 CDS
T07937
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00300
Lysine biosynthesis
gnt00550
Peptidoglycan biosynthesis
gnt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KP003_01295
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KP003_01295
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
KP003_01295
Enzymes [BR:
gnt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KP003_01295
Peptidoglycan biosynthesis and degradation proteins [BR:
gnt01011
]
Precursor biosynthesis
Amino acid ligase
KP003_01295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QXE87074
LinkDB
All DBs
Position
301198..302712
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AA seq
504 aa
AA seq
DB search
MKLKQLLACVPGAKVTGDDAIEIGSLCYDSRQVTPGAVFFALRGVKSDGTEYVASAVKGG
AVAIVADRPCAVAGVACVEVPDARRAMSLMAAVFYGTPTGEIPLVGITGTNGKTTTTYLV
EGIMAQAGIPAAVLGTISYRFGGTSIPAPNTTPESVDLQRILRELVDQGAKGAVMEVSSH
SLEQRRADGCIFDVAIFTNLTRDHLDYHLDMESYYQSKLRLFTDLLTPSAHKPLRRAVVN
LDDPYGARIAADSAAPVLTYAVNAPADLSVAEVNFSVHGIRCRLNSPVGEININSDLLGR
FNLYNMMGAVGAGLALGIPKEAIEAGIEGHKKVPGRLERVQNDQGIIVLVDYAHTGDALE
NVLSTIAELKTDRIITIFGCGGDRDKGKRPVMGEIAARYSDLAIVTSDNPRTEDPQAILE
DVRAGIPTGLKEYSLEELEGGVREKGFATIESRRTAVRTAILAARPGDIVLLAGKGHEDY
QIVGTEKFHFDDREEAAAALKLRA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaacaacttctggcatgtgttccgggcgccaaggtgaccggggacgacgcc
atcgagatagggtcgctctgctacgactcgcggcaggtgacgcccggtgccgtcttcttc
gccctgcgcggcgtgaagagcgacgggacagaatacgtggcatccgctgtaaaggggggg
gcggtcgcaattgttgcggaccgcccctgcgccgttgccggggtcgcctgcgtcgaggtc
cccgacgcccgccgcgccatgagcctcatggccgccgtgttctacggcacccccaccggg
gagatcccgctggtgggcatcaccggcaccaacggcaagaccaccaccacctacctggtc
gaggggatcatggcgcaggccggcatcccggcagcggttttgggcaccatcagctaccgc
ttcggcggcaccagcatcccggccccgaacaccacccccgaatcggtcgacctgcagcgg
atcctgagggagctcgtggaccagggggcgaagggcgcggtgatggaagtctcctcgcac
tccctggagcagcgccgcgccgacggctgcatcttcgacgtggccatcttcaccaacctg
acccgcgaccacctcgactaccacctcgacatggagtcctactaccagagcaagctgagg
ctcttcaccgaccttctgaccccgagcgcgcacaagccgcttcggcgcgcggtggtgaac
ctggacgacccctacggggcgaggatcgcggccgattccgcagcgccggtcttgacctac
gccgtgaacgcaccggccgacctgagcgtcgccgaggtgaacttctcggtgcacggaatc
cgctgccgcctcaactcgccggtgggggagatcaacatcaactccgacctcctgggtcgc
ttcaacctgtacaacatgatgggtgccgtgggtgccgggctcgccctggggatccccaag
gaggcgatcgaggccgggatcgaggggcacaagaaggttccggggcgcctggagcgggtc
caaaacgaccaggggatcatcgtgctggtcgactacgcccacaccggcgacgcgctggag
aacgtcctctccaccatagccgagctgaaaaccgaccggatcatcaccatcttcggctgc
ggcggcgaccgcgacaaggggaagcgcccggtgatgggggagatcgcggcccgctacagc
gacctcgccatcgtcacctcggacaacccgcgcaccgaggatccgcaggcgatcctcgaa
gacgtccgggccggcatcccgacgggcttgaaggagtacagcctggaggaactggaaggg
ggggtgcgcgagaaggggttcgccaccatcgagtcccggcgcaccgcggtgcgcaccgcc
atcctggccgcccggcccggcgacatagtgcttttggccgggaaggggcacgaggattac
cagatcgtgggcaccgagaagttccacttcgacgaccgtgaagaggcggccgcggccctg
aaactcagggcgtaa
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