Geomonas nitrogeniifigens: KP003_06160
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Entry
KP003_06160 CDS
T07937
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KP003_06160 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gnt03032
]
KP003_06160 (dnaB)
Enzymes [BR:
gnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KP003_06160 (dnaB)
DNA replication proteins [BR:
gnt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KP003_06160 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
TniB
AAA_16
AAA
AAA_24
nSTAND3
KTI12
Isochorismatase
divDNAB
Motif
Other DBs
NCBI-ProteinID:
QXE87982
LinkDB
All DBs
Position
complement(1421440..1422789)
Genome browser
AA seq
449 aa
AA seq
DB search
MNQAEMRKLPPQSIEAEMSILGGILVDNEAINRVLEVLTPEEMYRESHRKIMRAMIELNE
RGEPCDLITMTTILRKKGELEEVGGGAYLATLVDFVPMAANISYYCKIVKEKYITRKLIS
AATDIVSNGFEDKVEVEELLDSAQKVIFEISENKLRPSYYKVSDILKDTIKNIELLYEKK
ELVTGVPTGYTDLDKLTAGFHAGDLVIIAGRPAMGKTTFALNVAQYASVDSEKKFPAAIF
SLEMPKEQLVERLLCSASRVDLTRLRSGHLQENDWPKLIKGAGLLHNSKIFIDDTPSITV
MELRSKARRLKAEHDIGIIVIDYLQLMRGGANSESRQQEISEISRSLKALAKELSIPVIA
LSQLNRSLEQRTDKRPMMSDLRESGAIEQDADIIMFVYRGEVYDKENEDLKGKAEVIIGK
HRSGPIGTVDLAFRGEFTRFENLSSREEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcggagatgagaaaactgccgccgcagagcatcgaagccgagatgtccatc
ctgggagggatcctggtggacaacgaggcgatcaaccgggtgctcgaggtccttaccccg
gaggagatgtaccgggagagccaccgcaagatcatgcgcgccatgatcgagctgaacgag
cgcggcgagccctgcgacctgatcaccatgaccaccatcctgcgcaagaagggtgagctg
gaagaggtgggaggcggcgcctacctggccaccctggtcgacttcgtccctatggcggcg
aacatctcctactactgcaagatcgtgaaggagaagtacatcaccaggaagctcatctcc
gccgccaccgacatcgtcagcaacggtttcgaggacaaggtggaggtcgaggagctcctc
gactcggcgcagaaggtgatcttcgagatctctgagaacaagctccgcccctcctactac
aaggtcagcgacatcctcaaggacaccatcaagaacatcgagctcctctacgagaagaag
gagctggtgaccggcgtccccaccgggtataccgacctcgacaagctgaccgcgggcttt
catgccggcgacctggtcatcatcgcgggacgtccggcgatggggaagaccaccttcgcc
ctgaacgtggcccagtacgcgtccgtggactcggagaagaagttcccggccgccatcttc
tccctggagatgcccaaggagcagctggtggagaggcttttgtgctccgcctcccgggtc
gacctcacccgcctgcgctcgggccacctgcaggaaaacgactggcccaagctgatcaag
ggcgccgggcttttgcacaactccaagatcttcatcgacgacaccccgtcgatcacggtg
atggagctccgctccaaggcgaggcggctcaaggccgaacacgacatcggcatcatcgtc
atcgactacctgcagctcatgcgcggcggcgccaacagcgaatcgcgccagcaggagatc
tccgagatctcgcgctcgctgaaggcgctggccaaggaactctccataccggtgatcgcc
ctgtcgcagctgaaccgaagcctcgagcagagaaccgacaagcgcccgatgatgagcgac
ctgagggaatcgggggcaatcgagcaggacgccgacatcatcatgttcgtctaccgcggc
gaggtgtacgacaaggagaacgaggacctcaaggggaaggccgaggtcatcatcggcaag
cacagaagcggccccatcggcaccgtcgacctcgccttccgcggcgagttcacccgcttc
gagaacctgagcagcagggaagaatactag
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