Geodermatophilus obscurus: Gobs_5088
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Entry
Gobs_5088 CDS
T01163
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob00470
D-Amino acid metabolism
gob00550
Peptidoglycan biosynthesis
gob01100
Metabolic pathways
gob01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gobs_5088
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gobs_5088
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Gobs_5088
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gob01011
]
Gobs_5088
Enzymes [BR:
gob01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Gobs_5088
Peptidoglycan biosynthesis and degradation proteins [BR:
gob01011
]
Precursor biosynthesis
Amino acid ligase
Gobs_5088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
ADB77615
UniProt:
D2S835
LinkDB
All DBs
Position
5315432..5316421
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AA seq
329 aa
AA seq
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MTEPAPATESEAAPHALRAVVLAGGLNVEREVSLSSGTQVAEELARAGVEAELRDADAEL
LPGLAAAPADAVFIALHGATGEDGALRAVLDLAGVPYVGSPAASCRLAWDKPAAKSVVRS
AGVTTPDWVALPHSTFRELGAGAVLDLIVARLGLPLMVKPASGGSALGVQKVSRVEDLPA
AMVSCFAYGDTVMVERFVDGVELALSVVDLGEGPQALPAVEIAPESGVFDYTSRYTPGLT
EYHAPARVSDEVAGKAAELAVQVHRALGLADLSRTDAIVGPDGEVHFLEVNVSPGLTRTS
MFPMAVEASGSSLGDVLAGLLTRRASTTR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcccgcacccgcgaccgagtcggaggccgcgccgcacgcgctgcgcgccgtc
gtcctggccggtgggctgaacgtcgagcgggaggtcagcctctcctccggcacccaggtg
gccgaggagctcgcccgcgccggcgtggaggccgagctgcgtgacgccgacgccgagctg
ctgcccgggctcgccgccgcccccgcggacgccgtcttcatcgccctgcacggcgccacg
ggcgaggacggcgcgctgcgggcggtcctggacctggccggcgtcccctacgtcggctcc
ccggcggcgtcctgccggctggcctgggacaagccggccgcgaagtccgtcgtccgctcc
gccggcgtcaccacgccggactgggtggccctgccgcacagcaccttccgggagctgggc
gccggtgcggtgctggacctcatcgtcgcccgcctcggcctgccactcatggtcaagccc
gcctcgggcggctccgcgctgggcgtgcagaaggtcagccgggtcgaggacctgccggcc
gcgatggtcagctgcttcgcctacggcgacacggtcatggtggagcgcttcgtggacggc
gtggagctggcgctgtccgtggtggacctcggcgagggcccgcaggcgctcccggcggtg
gagatcgccccggagtcgggggtgttcgactacacctcccgctacacgcccggcctcacc
gagtaccacgcaccggcccgcgtctccgacgaggtggccgggaaggccgcagagctcgcc
gtccaggtgcaccgggccctcggcctcgccgacctctcccgcaccgacgcgatcgtcggc
ccggacggcgaggtgcacttcctcgaggtgaacgtctcgcccgggctgacccgcacctcg
atgttcccgatggccgtcgaggcgtccggctcctcgctgggcgacgtcctcgccgggctg
ctgacccggcgggcctccaccactcgctga
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