Gemmata obscuriglobus: C1280_03030
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Entry
C1280_03030 CDS
T05475
Name
(GenBank) hypothetical protein
KO
K19719
collagen type II alpha
Organism
gog
Gemmata obscuriglobus
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gog00536
]
C1280_03030
Glycosaminoglycan binding proteins [BR:
gog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
C1280_03030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_4
Cwf_Cwc_15
LysW-like_globular
CDC45
Motif
Other DBs
NCBI-ProteinID:
AWM36083
UniProt:
A0A2Z3GQH6
LinkDB
All DBs
Position
complement(693471..696563)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSIPITCSGCQATFDVPDNLAGKTIRCTSCKAQMTVPAEVPASADGAQTGAAKKPFGSGI
RPAVPPAPKPAPEPAAKTSPAKPAAKPVAAKAVVSDDDDDDDDDDKKVKKARPVAKVAAG
AKKPGITGSTKKRRADEDDDDDDDDDTPRRKKKAKGGSGPMIAIIAVATLGLALVAAVGI
YLASGSDDKNETASNTSGTTTAPGGAPPAPAPGGSGRPGPGGPGQASGSSLAPIEETPTP
AAPVGSTPGIGAPTPAPIGAPPGGLGGPAAPTANPFGAFGSLGTVGAWTSYTGDGFTAEF
PGTAGTQTVTFGGKTAPMTGVAASDQAFVIISEPLPPELMRLGADSKTILTAFATQLAAQ
VEAFKGKSPTDTAVDGHTAKEFDLSTPARAATAKFFIVKDRIFSVAAGKNTAGTSAARAD
LTRFFNSVKITYKGDLVAGGPGTTPGMPPGASMPGMPGGTEQPGMPPGGTGQPPIGGIGQ
PPGGIGNPAAGIGDGNKKAKIEKFYAGAFDAEKKEFYAIDERAVAGDPRIKKGWLRRYSY
PDFNKVLGRYHLPQMASRAVIDSKAGLLYTATVTNPFAANLNLLDNGAASGDIAIYDLKQ
IRDGKTADGKELKDGMELKPVATVSLKSTIQAIELSEDGTALYALLSTTTPKGKRSSLSV
INTETRKESRTALDEKMRDMAKAGDGKSLIMFEDFLTSRTGSTKVGTFDFGSMSLINVTS
VPGGVWDLAPLKSGGAIVTVQVTNQPNQPPGGIGGPPGIGGPPGIGGPPGIGRPGMGGPG
AIGGPGMAGGGSGQANNQMNFRLYLVNEKGNTELDLGTAQRFSNAGYAEFDAENKKLFVS
SCRAQGFDVFEVTDATAANGLKLVSTIQTAGREPVGGHCLVSPDGKTLVFHNGVVIEAGN
VGGAPPSTVPSGSGIMPPGPGLPGSPGAIPGGPGAAPGSMPGGGNALPGGMGSPPGPMGS
PPGGMGSPPGPMGSPTPAGSSPPGGMGSPSTPAMPLPGGTTGSSSAPAAPPAGGTVPGRP
GSPRPPASDK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcccaattacgtgctccgggtgtcaggccacgttcgacgtgcccgacaatctc
gccggcaaaaccatccgctgtacctcatgcaaggcgcagatgacggtccccgccgaggta
ccggcgagcgccgacggggcgcagacgggcgcggccaaaaagccgttcggctcgggcatc
cgacccgctgtgccaccggcccccaaaccggcaccagaacccgcggcgaagacgagcccg
gccaagccggcggcgaaacccgtcgcggccaaagcggtcgtgtccgacgacgacgacgac
gacgacgacgacgacaagaaagtcaagaaagcgaggcccgtcgcaaaggtggccgccggc
gcgaagaagcccggcatcaccggttcgaccaagaagcgccgggcagacgaggatgatgac
gacgacgatgacgacgacaccccgcgccggaaaaagaaagcgaagggcggctccggtccg
atgatcgcgatcatcgccgtcgccacgttggggttagccctcgtcgcggccgtcggcatt
tacctcgcgtccgggtccgacgacaagaacgaaacggcctccaacaccagcgggacaacg
accgccccgggcggagccccacccgctcccgcccccggtggttctggcaggcccggccct
ggcggccccgggcaagcgtccggctcgtctctggcaccgatcgaagaaacgccaactccc
gctgcgccagtcggaagtacgcccgggatcggagcacccacccccgccccgattggcgcg
cccccaggcgggctcggcggaccggccgccccgacggcaaacccgttcggcgcgttcggg
tcgttgggcacggtgggtgcatggacctcctataccggcgacgggtttaccgccgagttc
cccggcaccgcgggcacgcaaacggtcaccttcgggggcaagacggcgcccatgaccggc
gtcgccgcgagcgaccaggcgttcgttatcatcagcgaaccgctgccgccagaactcatg
cgcctcggcgccgacagcaagaccatactcacggccttcgccacccagttggccgcccag
gtcgaggcgtttaaaggcaaatctcccaccgacacagcggtggacgggcacacggccaag
gagttcgacctgtcgactccggcgcgtgccgcgaccgccaagttcttcatcgtcaaggac
cgcatcttcagcgtggctgcgggcaaaaacacagccggaacgagcgcggcgcgggccgac
ctgacacggttcttcaactccgtcaagatcacctacaaaggtgacctcgttgccggcggc
cccggcaccacgccgggtatgcccccgggcgcgtccatgcccggtatgcccggagggacc
gaacaaccgggcatgcccccgggcgggaccggccagccgccaatcggcgggatcggccaa
ccgccgggcgggatcggcaaccccgcagcaggcatcggcgacgggaacaagaaggccaag
atcgagaagttctacgccggcgcgttcgacgccgagaagaaagagttctacgcgatcgac
gagcgggccgtcgccggcgaccctcggatcaagaagggctggctccgccggtactcgtac
cccgactttaataaggtgctcggccggtaccacttgccgcaaatggcctcccgcgcggtc
atcgattcaaaggccgggctgctgtacaccgccaccgtcaccaacccgttcgccgcgaac
ctgaacctgctcgacaacggggccgcgtccggcgacatcgcgatctacgacctgaagcag
attcgcgacggcaagaccgcggacggaaaagagctgaaagacggaatggaactgaaaccg
gttgcgacggtcagcctcaagtccacgatccaggcgatcgagctgtccgaggacggaacg
gcgctgtacgcgctcctcagcaccacgactcccaaaggcaagcggtcgtcgctctcggtc
atcaacaccgagacccggaaggagagtcgcaccgcgctggacgagaagatgcgcgacatg
gccaaggccggcgacgggaagagcctgatcatgttcgaagacttcctgacgagccggacc
ggtagcaccaaggtcggcaccttcgacttcggctccatgtcgctgatcaacgtgacctcg
gtcccgggcggcgtgtgggacttggcccctctgaagtccggcggcgcgatcgtcaccgtt
caggtcacgaaccagccgaaccaacccccaggcggcatcggcggccctcccggcatcggc
ggccctcccggcatcggtggccctcccggcatcgggcggccggggatgggaggaccgggc
gcgatcggaggtccgggcatggccggaggcgggagcggacaagcgaacaaccaaatgaac
ttccgactctacctcgtgaacgagaagggcaacacggaactcgacctcggcacggcccag
cggttctcgaacgccggttacgcggagttcgatgccgaaaacaaaaagctgttcgtctcc
tcctgccgggcgcagggcttcgacgtgttcgaggtgaccgacgcgactgcggcaaacggc
ctgaaactcgtctcgacgattcagaccgccgggcgcgagccggtcggggggcactgcctc
gtgtctccggacggcaagacgctggtgttccacaacggtgtggtgatcgaagcgggtaac
gtcggcggcgctccgcccagtacggttccgtcgggaagcggaatcatgcccccgggtccg
ggcctgccgggcagtccgggcgcgatccccggcggtcccggggcggcccccggcagcatg
ccgggtggcgggaatgccctgcccggcggcatgggttccccccccggcccgatgggttca
ccccccggcggcatgggttcaccccccggcccgatgggctccccgacgcccgccggctcc
tcgcccccgggtggcatgggctcgccttccaccccggcaatgccgcttccgggcgggacc
actggatcgtcttctgcacccgcggcaccgccagcgggcggaacggtgccgggccggccg
ggaagcccgcgcccgcccgcatctgacaagtaa
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