Gemmata obscuriglobus: C1280_05155
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Entry
C1280_05155 CDS
T05475
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gog
Gemmata obscuriglobus
Pathway
gog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1280_05155 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gog03021
]
C1280_05155 (rho)
03019 Messenger RNA biogenesis [BR:
gog03019
]
C1280_05155 (rho)
Transcription machinery [BR:
gog03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C1280_05155 (rho)
Messenger RNA biogenesis [BR:
gog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1280_05155 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
Mor
Spore_III_AA
OB_RNB
AAA_14
ResIII
ATPase_2
AAA
Motif
Other DBs
NCBI-ProteinID:
AWM36469
UniProt:
A0A2Z3GQ93
LinkDB
All DBs
Position
1269006..1270478
Genome browser
AA seq
490 aa
AA seq
DB search
MPDAKGVEGSPLPRPSLRAAAIAGKRPFRKPEGPPPVASAPPAAPPPAERPERERPERPE
RPERQRPAGSGARLDDLYRMPMPELFALAEKEGIREHTGMSRAQLIVGVVRRQIERGEVV
RGSGTLEVLPDGYGFLRSQAHNYLASPEDIYVSPSQIRRMSLRTGLVVEGPIRLPIENQD
NFALMQIELVNGKHPDEGTGVTSFEDLTPLHPNERLKLETTPDDLSMRIVDLITPIGKGQ
RGLIVAPPRTGKTILLSKMANAILKNHPESYVFVLLVDERPEEVTEMQRLVQSPNAEVVA
STFDEPPEEHIHVSEIVLEKAKRMVEMRRDVIILLDSITRLARAHNTEAPGGGKLLSGGL
DSNAMQKPKRFFGAARNVEEGGSLTILATALVDTGSKMDEVIFEEFKGTGNSELHLDRRL
VEKRVYPAIDAVRSGTRKEELLMHPEEYEKVRILRRVLADMHPVEAMEMLINKSKKTKSN
LEFLLSMNLG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgccaaaggcgtcgaagggtcgccgctgccgcggccctcacttcgtgctgcc
gcaatcgccggcaagcgccccttccggaaacctgaaggtccgcccccggtcgcttcggcg
ccgcccgccgcacccccgcccgccgagcgcccggagcgtgagcggcccgagcgcccggag
cggcccgaacgtcagcgccccgcgggcagcggggcgcgcctcgacgacctgtaccggatg
ccgatgcccgagctgttcgcgctcgcggaaaaagagggcatccgcgaacacaccgggatg
agccgcgcgcagctcatcgtgggcgtggtgcggcgccagatcgagcgtggcgaggtggtc
cgcgggtccggcaccctggaggttctgcccgacggctacgggttcctccgcagccaggcg
cacaactacctcgccagccccgaagacatctacgtctcccccagccagatccggcgcatg
agcctgcggaccgggttggtggtcgaagggccgatccggctgcccatcgagaaccaggac
aacttcgcgctgatgcagatcgaactcgtcaacgggaagcacccggacgagggcaccggc
gtcaccagcttcgaagacctgaccccgctgcacccgaacgagcggctcaagctcgaaacg
acgcccgacgacctgtcgatgcggatcgtcgacctcatcacccccatcggcaagggccag
cgcgggctgatcgtcgcgccgccccgcaccggtaagaccatcctcctctcgaagatggcc
aacgccatcctcaagaaccaccccgagtcgtacgttttcgtgctgctggtggacgagcgg
ccggaagaagtgaccgagatgcagcggctcgtccagagcccgaacgccgaggtggtggcg
agcacgttcgacgagccgccggaagagcacatccacgtgtccgagatcgtcctggagaag
gcgaagcggatggtggaaatgcggcgggacgtcatcatcctgctcgactcgatcacccgt
ctggcccgcgcccacaacaccgaggcccccggcggcggtaagctcctgtccggcggtctc
gattccaacgcgatgcagaagccgaaacggttcttcggtgccgcgcggaacgtcgaggag
ggcggctcgctgaccatcctcgcgaccgccctcgtggacaccggctcgaagatggacgag
gtcatcttcgaggagttcaagggcacaggtaacagcgagctgcacctggaccgccggctc
gtcgagaagcgcgtgtaccccgcgatcgacgcggtgcgcagcgggacgcgcaaggaagaa
ctcctcatgcacccggaggagtacgagaaggtgcgcatcctgcgccgcgtgctggccgac
atgcacccggtggaagcgatggagatgctcatcaacaagtcgaagaagacgaagtcgaac
ctggagttcctgctctcgatgaacctgggctga
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