Gordonibacter pamelaeae: GPA_05350
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Entry
GPA_05350 CDS
T02609
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
gpa
Gordonibacter pamelaeae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
dCache_1
sCache_3_3
GAF_3
Rbsn
Motif
Other DBs
NCBI-ProteinID:
CBL03490
UniProt:
D6E6Z3
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All DBs
Position
complement(525209..526762)
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AA seq
517 aa
AA seq
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MAGEARNGQGASRFSYKQMALYGVMLAVASVLVVFVFGAFMAVSDMRHEADVSIASALPR
VEGRIDETFKLLETLAERETLYDPDVDVMTKVDLVDKVNEHFGFFLLCYVDAGINVWDAT
GPASLASRSHMQRVYSTGERYVTDSFVAGADGTTLNYTVIVPLRDGRGAMTGSLFASIYF
DEMVEMLDESRASSYVESLIVGGKGQVMSATSGHEYDDPFLDPIRDTIAFGMTADIVQSE
LLALNPVTFWTVDGLDVRYYSAYPVVGTEWDIVGVASFWDAYAKVMRAVFPLAIVAVAVI
ATAFLLMRRPFARQMEEARLLERSVAELQKKVYTDGPAESGFADLIELTSSGLSDGLTGT
VTRSVFASRLANALDNAGDGIYALCFIDLDDFKNINDTFGHATGDVALKTVGFLLREYER
RYDGLVGRYGGDEFTLLMTDFDDEAELRRVLDELTGRLHVSIQAGGSSFEVHCSVGATVW
DRQADADELLEQADRALYLVKQRGKEGYCLYQDEGLS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgaagcgcgcaacgggcagggggcctccaggttctcgtacaagcagatggcg
ctctacggcgtcatgctggccgtcgcctccgtcctggtggtgttcgtgttcggcgcgttc
atggcagtctccgacatgcggcacgaggcggacgtgtcgatcgcgtcggcacttccccgc
gtggaagggcgcatcgacgagacgttcaagctgctcgagacgcttgcggagcgcgagaca
ctctacgatcctgacgtggatgtcatgacgaaggtcgacctggttgacaaggtgaacgag
catttcgggttcttcctgctctgctacgtggatgccggcatcaacgtgtgggacgcgacg
gggcccgccagcctggccagccgctcgcacatgcagcgcgtgtactccaccggcgagcgc
tacgtcaccgacagcttcgtggcgggcgccgacggcaccacgctcaactacacggtgatc
gtgccgctgcgtgacgggcggggcgccatgacaggctcgctgttcgcgtccatctacttc
gacgagatggtggagatgcttgacgagagccgtgcgagctcgtacgtggagtcgctcatc
gtgggcggcaagggccaggtcatgtccgccacgtcgggacacgagtacgatgaccccttc
ctcgaccccatccgcgacaccatcgccttcggcatgacggccgacatcgtgcaaagcgag
cttttggccctgaacccggtgacgttctggaccgtcgacggcctcgacgtgcgctactac
tccgcctatcccgtggtgggcaccgagtgggacatcgtgggcgtggcgagcttctgggac
gcctacgccaaggtcatgcgcgccgtcttcccgctggccatcgtggcggtggcggtcatc
gccacggccttcctgctcatgcgccgccccttcgcgcgccagatggaggaggcacgcctt
ttggagaggtcggttgccgagctgcagaagaaggtgtacaccgacgggcccgccgaaagc
ggcttcgccgacctcatcgagctcacctcctcggggctctccgacggactgaccggtacg
gtgacgcgctcggtgttcgcaagccggctcgccaacgcgctggacaacgccggcgacggc
atctacgcgctctgcttcatcgacctcgacgacttcaagaacatcaacgacacgttcgga
catgccaccggcgacgtggcgctcaagaccgtgggctttctgctgcgcgagtacgagcgc
cgctacgacgggctggtcggccgctacgggggagacgagttcaccttgctcatgaccgac
ttcgacgacgaggccgagctgcgtcgcgtcctcgacgagctcaccgggcgcctgcacgtg
agcatccaggcaggtggatcatcgttcgaggtgcactgcagcgtgggcgcgacggtgtgg
gaccgccaggcggacgccgacgagctcttggagcaggcagaccgggcgctgtacctcgtc
aagcagcgcggcaaggaaggctactgcctctaccaggacgaggggctgtcgtga
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