Gamma proteobacterium HdN1: HDN1F_13720
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Entry
HDN1F_13720 CDS
T01300
Name
(GenBank) Transcriptional regulatory protein, Crp family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb02020
Two-component system
gpb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDN1F_13720
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDN1F_13720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gpb03000
]
HDN1F_13720
Transcription factors [BR:
gpb03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
HDN1F_13720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_46
HTH_24
Sigma70_r4
MarR_2
TrmB
MarR
GntR
HTH_IclR
HTH_CodY
Rrf2
UCH_N
Motif
Other DBs
NCBI-ProteinID:
CBL44955
UniProt:
E1VJG3
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Position
complement(1710211..1710861)
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AA seq
216 aa
AA seq
DB search
MAELGKISIFAGLSDSDRQVIESRCITRTYPRNTLIINEGDQANAMYMMVSGKVRVYVSD
GAGKEFILNSMGPGEYFGELSLLDDETRSASVITTEKSTFSILYKDDFSKLILQHPEIAL
ALLRSFSATIRQLTGNIKTIALQDVYGRIRKTLLSLALEKDGVFVIEERLTQQDIANRIG
SSREMVARILKELAVGGYIEIDKKHIRMLKKLPESF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactagggaaaatctctatctttgcagggctcagcgacagcgatcgacaagtc
atcgagtcgcgctgcatcacgcgcacctatccaagaaatacattgatcatcaacgaaggt
gatcaggcgaatgccatgtatatgatggtgtcaggcaaggtgcgtgtttatgtgagtgac
ggtgccggcaaggagtttattttaaattctatggggccaggcgaatacttcggcgaactt
tctctcttggatgacgagacacgttcggcgtcggtgatcaccaccgaaaaatcgactttt
tcgattttatacaaggatgattttagcaagctcatcttgcaacatcctgaaatcgcgctc
gctttgcttcgcagctttagcgccacgattcgccagcttaccggaaacatcaaaacgatc
gcactacaagatgtctacggcagaatccgaaagactctattatctcttgcgttggaaaaa
gacggcgtttttgtcattgaggagcgtcttactcaacaggatattgccaaccgcatcggt
tcatcacgagaaatggttgcgcgcatcctgaaagaacttgccgttggtggatacattgag
attgataaaaaacatatccgaatgctgaaaaaattgcctgaaagcttttaa
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