Gamma proteobacterium HdN1: HDN1F_15600
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Entry
HDN1F_15600 CDS
T01300
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00020
Citrate cycle (TCA cycle)
gpb00785
Lipoic acid metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
gpb01210
2-Oxocarboxylic acid metabolism
Module
gpb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HDN1F_15600 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HDN1F_15600 (sucA)
Enzymes [BR:
gpb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HDN1F_15600 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
DUF2680
HD_assoc
Motif
Other DBs
NCBI-ProteinID:
CBL45143
UniProt:
E1VK01
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All DBs
Position
1984226..1987069
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AA seq
947 aa
AA seq
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MGDGVMYRQWSTSHLTGTNAAYVEELYESYLKNPNSVSEEWRNQFDKLPRVSSVESDIPH
STVREHFLYLAKNRSRTQALAVGSVSSDHDKKQVKVMQLITGFRVRGHQRAHLDPLGLMK
RRNVPDLALAHHGLSEADLDTTFHTGSLFLGTEEARLSEIVEALDRTYCGSIGAEYMHIV
DTSEKRWIQQRMESVRSQPNYSRDVKVHLLERLTAAEGLEKVLASKYPGTKRFGLEGGES
LIPCVDEIIQRAGSYGVKEVVIGMAHRGRLNVLVNTLGKNPSDLFSEFEGKMKMAEYGSG
DVKYHQGFSSNVMTPGGEVHLALAFNPSHLEIVSPVVEGSVRARQDRRKDKTGDLVVPII
IHGDAAFAGQGVVMETLQMSQTRGYRTGGTVHIIVNNQIGFTTSNPKDARSTEYCTDVAK
MVQAPIFHVNGDDPEAVLFVTQMAIDFRQQFKRDVVIDLICYRVRGHNEADEPAITQPMM
YKVIRSKKSSRTLYVEKLVEAGILTLEQADTMLDEYRSALDEGRHVVAALIKEPNKNLFV
DWTLYLGHEYNAYFETGVALKQIQEIANRMEKVPEGFAAMRQVEKIVEDRRRMAVGALQV
DWGFAETMAYATLLAEGYPVRLTGQDVGRGTFSHRHAVMHNQLKRGVFIPLRNAIENDAT
TFDIYDSLLSEEAVLAFEYGYATTSPKGLVIWEAQFGDFANGAQVVIDQFISSGEHKWQR
LCGLTMLLPHGYEGQGPEHSSARLERFLQLCAEQNMQVCVPSTPAQVFHMIRRQAVRPLR
KPLIVMSPKSLLRHKHCKSSVEELSEGAFQTVLGDATVSDPSQVTHIILCSGKVYYDLLE
HKTETEAHHVALIRIEQLYPFPEEELFAAIKPFTELKSAVWCQEEPLNQGAWYCSQHHMR
RVTQMHDNKPYLNYAGRKPSAAPAAGYMSMHVEEQRQLVADAFTIQK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacggcgtgatgtaccggcagtggagtacttcccatcttactgggacgaatgct
gcctatgtcgaagagctgtatgagtcgtatctaaaaaatccgaattctgtttcggaggag
tggcgcaaccagtttgacaagctcccccgcgtttcttcagtcgaaagcgacattccgcac
tccacagtgcgtgaacactttctctatcttgccaagaatcgtagccgcacacaggcgctt
gcggtaggcagcgtatcttccgaccacgacaaaaagcaagtgaaggtgatgcagttgatc
accggcttccgcgttcgtggccatcagcgcgctcacctcgacccgctcggcctcatgaag
cgccgcaacgtgccggatctcgcacttgcgcatcacggcttatctgaagcggatctcgat
accacatttcataccggcagcttgttcctgggtacagaagaagcacggctttcggaaatt
gtcgaagcactggatcgcacttattgcggtagcatcggtgcggaatatatgcacattgtt
gatacctccgagaagcgctggattcaacagcgaatggagagtgtgcgttctcagcccaac
tacagccgcgatgtaaaagtccatttgctggagcgcctcactgccgctgaggggctggaa
aaagttttggcaagcaaataccccggcaccaagcgttttggcttggagggcggtgaaagc
ctgatcccctgcgtggatgagatcattcagcgtgcaggtagctatggcgtcaaagaagtc
gtcataggcatggcccaccgtgggcggctgaacgtgctcgtgaataccctcggtaaaaat
ccttctgacttgtttagcgagttcgaaggcaagatgaagatggccgagtacggctctggc
gacgttaaatatcaccaagggttttcgtcgaacgttatgacgccgggtggcgaagtacac
cttgcgcttgcgtttaacccttcgcacttggaaatcgtcagccccgtggtagagggttct
gtgcgtgcgcgccaagatcgacgcaaagacaaaactggcgatttagttgtgcccatcatt
atccacggtgatgcggcttttgccggtcagggcgtggtgatggaaacgttgcagatgtcg
caaacgcgcggctatcgcacggggggtacggttcacattattgtgaacaaccagatcggt
tttaccaccagcaatcccaaggatgcgcgttctacggaatactgcacagacgttgcaaaa
atggtgcaggcgcctatttttcacgtcaatggcgacgatccagaagcggtgttgttcgtt
acccaaatggccatcgacttccgtcagcagttcaagcgggatgttgtgattgacctgatc
tgctaccgcgttcgcggccataacgaggcagatgagccggcaattacgcagccgatgatg
tacaaggtgattcgtagtaaaaaatcatcgcgtacgctgtacgtcgaaaaactggtagaa
gccggcattttaacgctcgaacaggcagacaccatgttggacgaatatcgcagcgctctc
gacgaggggcgtcacgtggttgctgctttgatcaaggagcccaacaaaaatctatttgtg
gactggacgctttatcttggccatgagtacaacgcctattttgaaacaggggttgctctt
aaacaaatccaagaaatcgccaaccgtatggagaaggttccagaaggttttgctgccatg
cgtcaagtcgagaaaatcgtcgaggatcgtcgccgcatggcggtaggtgctctacaggtc
gattggggttttgcggaaaccatggcgtatgcaaccctgctcgcggagggctatccagtg
cgcttgactgggcaggatgtcggccgcggaaccttctcgcatcgtcatgccgtaatgcac
aatcagctgaagcgcggcgttttcatcccacttcgcaatgcgattgaaaacgatgccacg
acgtttgatatctacgattcactgctttcagaagaagctgtgctggcgttcgaatatggc
tatgccaccacttctccgaagggtttggtgatctgggaagcgcagtttggcgattttgcg
aatggtgcgcaggtggtaattgatcagtttatttcttctggtgagcataaatggcaacgc
ttgtgtgggctcacgatgttgctgccgcacggttatgaaggacaagggcctgagcattcc
tccgcacgtctagagcgttttctgcaattatgtgccgagcaaaatatgcaggtttgcgta
ccaagcacacccgcacaggtatttcacatgatccgccggcaagcggttcgcccgctgcgc
aagcccttgattgtgatgtcgccgaagagtttgttgcgccacaagcactgcaaatccagc
gttgaggaactcagcgaaggcgcgttccaaacggtattgggtgatgctacggtttcagat
ccgagccaagttacccacataattttgtgtagcggtaaggtctactatgatctcttggag
cacaaaactgaaaccgaagcccaccatgttgccttgatccgtatcgagcagctgtatccg
ttccctgaagaggagctatttgcagcaatcaagccgtttaccgagttgaaatcagcggtt
tggtgtcaggaagaaccgctgaaccaaggcgcatggtactgcagccagcaccacatgcgg
cgggtaacgcaaatgcacgacaataagccttatttgaattatgccggacgcaagccgtct
gcagcaccggcggcgggctatatgtcgatgcatgttgaagaacagcgccaactcgtggcc
gatgcattcaccattcaaaaatga
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