Gemmatimonas phototrophica: GEMMAAP_18545
Help
Entry
GEMMAAP_18545 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gph02000
]
GEMMAAP_18545
Transporters [BR:
gph02000
]
Other transporters
Pores ion channels [TC:
1
]
GEMMAAP_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
OMP_b-brl_3
CooC_C
EMC7_beta-sandw
Big_12
PEGA
Motif
Other DBs
NCBI-ProteinID:
AMW06242
UniProt:
A0A143BNW4
LinkDB
All DBs
Position
complement(4419059..4422016)
Genome browser
AA seq
985 aa
AA seq
DB search
MRRPGAWRSLAHAVVPAIVLLTSSASALHAQATGTVTGRVVDAVNGQPIAAAQITVNGTT
LGRATGEDGRFTLTAIPTGTQVLVVRRIGYQQQSRSVAVSASAPVTVNFSLATSSVSLAG
VVVTATGEERKKEVGNAVTTVSAADFEKAGAGNTQQILQGRSTGVTVLQNGGTPGAGGTI
RLRGVNSITQGNRPLIYVDGIRIFNGNSPTGVSSRQSVSPLNDIPASDIERIEVVKGPAA
TTLYGTEASGGVIQIFTKRGRDGAASWTLDASGGINSMGEFGPASDPTGMFLKQCRGPNM
VDAAGVPFEDATCPESGSWLQNGFLGRYSLGVRGASGGINYAISGNLENEEGVLRVGSNR
TGGLRTNIGFAPSKTITLALNSSWQRRNTAMISDGNSADAILLNISRGPGSNFRGSGCST
TTVTCVVNDTMFSKANTIGGDHFIVGGTATWTPFEKLTNRLAIGIDYNSTDQRTVNPFGY
PRTPTGQYFQTLWNRQLITVDYATTWKQTYSKNFVGTTSFGAQLFDSRLNSTELRGDNFA
GPGIPTLVSASLRQITDVNQQRVINAGLFAQQMIGWRDRVFITAGARVDGNSAFGQSFGL
QTYPKVSGSWVLSEESFWPTSLIETFKLRGAIGESGKAPGAFDATRTWNPIAAEGGLSAF
TPGQLGNANLGPERTRETEVGFDAGLLNGRFGLVFTYFNARTNDAIINVAYPPSNGFSAN
QPENVGSIKNTGFEVQATTNLDLTSWAKLEARVQFTKMQGEAVDLGGRIITIDALSRSYV
QEGLPLPAYVGRKVQNPDAFETPVIVEGEFLGQTFADKIINPSLTLSLFNNLSFEVVGEF
QRGGHLLNANGFQNAGLGIWQPCFAAQKALRAAANGDASALATVNARDRMRCSIVASQRD
YSYWVESADFFKVRNISVAYDVPKRFTPGARSMTVTFAGRNLFRSTNYTGTDPEVADQAT
STFSRRDYYNFPPYRTFLFSVRTNF
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccctggcgcgtggcgatcgttggcccatgctgtggtgccggcgatcgtctta
ctgaccagcagtgcgtctgctctgcacgcgcaggcgaccggcacggtcacgggccgcgtc
gtcgacgccgtcaacggccagcccatcgccgccgcccagatcaccgtgaacggcaccacc
ctgggccgtgcaactggtgaagatggtcgcttcaccctgaccgccatcccgacggggaca
caggtcctggtggtccgccgcatcgggtatcagcagcaatcgcgcagcgtggcggtgtcg
gccagcgcaccggtcacggtgaacttctccttggccaccagcagcgtgtcgctggcgggt
gtcgtggtgacggcaaccggtgaagagcgcaagaaggaagtgggcaatgcggtaaccacg
gtgagcgcggccgatttcgaaaaggcgggcgctggcaacacgcagcagattctgcaggga
cgctcgacgggcgtcaccgtgctgcagaacggcggcacaccgggcgccggcggcacgatt
cgtctgcgtggtgtgaactccattacgcagggcaatcgtccgctcatctacgtcgacggc
attcgtatcttcaatggcaattctcccacgggcgtgtcctcgcgtcagtcggtctcgcca
ctgaacgacatcccggcctcggacatcgagcgcattgaagtggtaaaggggccggcggcg
accacgctgtacggcacggaagcctccggtggtgtgatccagatcttcaccaagcgcggc
cgtgatggcgcggcgtcgtggacgctcgatgcctcgggcggtatcaacagcatgggcgag
ttcggcccggcgtcggaccccaccggcatgttcctcaagcagtgccgtggccccaacatg
gtggacgcggccggtgtgcccttcgaagatgccacctgcccggaaagcggctcgtggttg
cagaacggcttcctgggccgctactccctgggtgtgcgcggcgccagcggtggcatcaac
tacgccatttcgggcaatctcgaaaatgaagaaggtgtgctccgcgtgggcagcaaccgc
acgggtggcctccgtaccaatatcgggttcgccccgtccaagaccatcacgctggccctc
aacagcagctggcagcgtcgcaacacggcgatgatctccgacggcaacagcgccgatgcc
attctgctcaacatctcgcgcggccccggatcgaacttccgcggcagtggctgcagcacc
accacggtgacctgcgtggtgaacgacacgatgttctccaaggccaacaccattggcggc
gatcacttcattgtgggcggcaccgccacgtggacgccgttcgagaagctgaccaatcgt
ctcgccatcggtattgactacaacagcaccgaccagcgcacggtcaacccgttcgggtat
ccgcgcacgcccaccgggcagtacttccaaacgttgtggaatcgtcagctcatcacggtg
gactacgcgaccacgtggaagcagacgtactcgaagaacttcgtcggcaccacgtcgttc
ggcgcccagctgttcgacagccgtctcaactccaccgagttgcgcggcgacaactttgcc
ggaccgggcatccccacgctcgtgtcagcgtcactgcgtcagatcaccgacgtcaatcag
cagcgcgtgatcaacgccggtctgtttgcccagcagatgatcggctggcgcgatcgggtg
ttcatcaccgccggcgcccgcgtggacggcaacagcgcgttcggacagagcttcgggttg
cagacgtatcccaaggtgagcggttcctgggtgctctccgaagaatcgttctggcccacg
tcgctcattgaaacgttcaagttgcgcggcgcgattggtgagtcgggcaaggcgccaggc
gccttcgacgcgacccggacctggaacccgattgccgccgaaggcgggctgtcggcgttc
acgccgggacagctgggcaacgccaacctcggccccgagcgcacacgcgaaacggaagtg
ggtttcgatgccggtctgctcaacggccggttcggcctcgtcttcacctacttcaacgcg
cggaccaacgacgcgatcatcaacgtcgcctatccgccgtcgaatggctttagcgccaat
cagcccgagaacgtcgggtcgatcaagaacaccggctttgaagtgcaggccacgacgaac
cttgacctgacgagctgggccaagctggaagcgcgtgtgcaattcaccaagatgcagggc
gaagctgtggatctgggtggacgcatcattaccatcgacgcgctgtctcgcagctatgtg
caggaagggctgccgctgcccgcctacgtgggtcgcaaggtgcagaacccggacgccttt
gaaacaccggtgatcgtggaaggggagttcctcggccagacgttcgccgacaagatcatc
aacccctcgctgacgctgtcgctgttcaacaatctgtcgttcgaagtggttggtgagttt
cagcgcggtggacatctgctgaatgccaacggtttccagaacgccggcttggggatctgg
cagccgtgctttgccgcccagaaggcgctgcgcgccgccgccaatggtgacgcctcggcg
ctggccacggtgaacgccagggatcgcatgcgttgctccatcgtcgcttcgcaacgcgac
tacagctattgggtggaaagcgccgacttcttcaaggtgcgcaatatctccgttgcctac
gacgtgccgaagcgctttacgcccggtgcccgcagcatgactgtcaccttcgccggtcgc
aacctgttccgcagcacgaactacaccggcaccgatccggaagtcgccgaccaggccacc
agcacgttctcgcgtcgcgactactacaactttccgccctaccgcacgttcctcttcagt
gtgaggacgaacttctga
DBGET
integrated database retrieval system
