Gemmatimonas phototrophica: GEMMAAP_19465
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Entry
GEMMAAP_19465 CDS
T04580
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00470
D-Amino acid metabolism
gph00550
Peptidoglycan biosynthesis
gph01100
Metabolic pathways
gph01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEMMAAP_19465
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GEMMAAP_19465
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GEMMAAP_19465
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gph01011
]
GEMMAAP_19465
Enzymes [BR:
gph01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GEMMAAP_19465
Peptidoglycan biosynthesis and degradation proteins [BR:
gph01011
]
Precursor biosynthesis
Amino acid ligase
GEMMAAP_19465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
GARS_A
ATP-grasp_4
ATP-grasp_3
ATPgrasp_ST
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
AMW06377
UniProt:
A0A143BMT3
LinkDB
All DBs
Position
complement(4644910..4645947)
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AA seq
345 aa
AA seq
DB search
MPTPLKITVLLGGVSAERDVSLSSGLRIAAALREKGHEVICLDPAEGVLTRETERGLLAT
GVGSAPPSLAALAGMAAQSLSPTLGTLPEVTEADCVFLALHGGQGEDGTVQALLDMVGVP
YTGSGHLASALAMDKHLSKVVLRAAGVATANWMMAPTDGSVLDPHEVGRHLDWPVVVKPS
KQGSTVGLSIVREPEALAAAVTEAFKYDDEVMVERFVPGQELTVGILGDQVLPTIEIVPM
KELYDYECKYTPGMAKEFVAELSDEVQSKLADQARKAFDALKLGGYARIDFRLDPQGQPW
CLEANTLPGMTPTSLIPQAAAAAGVLFPDLCERIVNLALAKQRDR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccccctgaaaattacggtcctccttggcggcgtttccgccgaacgtgatgtc
tcgctgtcgagcgggctgcgcatagccgcggcgctccgcgagaaggggcatgaggtcatt
tgcctggaccccgcggagggggtgctgacgcgggagacggagcgggggttgctggcgacc
ggtgtggggagtgcgccaccgtcgctggccgccttggcggggatggcggcccaatcattg
tcgcccacgctggggacgctgccggaggtgaccgaggccgactgcgtgtttctggcgttg
cacggcggccagggggaagacggcaccgtgcaggcgctgctcgatatggtgggggtgccc
tatacggggagcggtcacctggcgagcgcgctggccatggacaagcacctgagcaaggtg
gtgttgcgggcggccggggtggcgacggccaactggatgatggccccgaccgacggctcg
gtgctcgacccccacgaggtggggcggcacctggattggccggtggtggtgaagccgtcc
aagcaggggagcacggtggggctcagcattgtccgggaaccggaggcgctggccgcggcg
gtgaccgaggcgttcaagtacgacgacgaagtgatggtggagcgcttcgtgccggggcag
gagctcacggtgggcattctgggcgatcaggtactgcccacgatcgagattgtgccgatg
aaggagctgtacgactacgagtgcaagtacacgccggggatggccaaggagttcgtggcc
gaactatcggatgaggtgcagtcgaagctggcggatcaggcccggaaggcgtttgacgcc
ctcaagctgggcggctacgcgcgcattgatttccggctggacccccaggggcagccgtgg
tgtctggaggccaacacgttgcccggtatgacacctaccagtctcatcccacaggcggcg
gccgccgctggtgtcttgtttcccgatctgtgtgagcgcatcgtcaatctggcgctcgcg
aagcagcgggatcggtag
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