Paraglaciecola psychrophila: C427_0347
Help
Entry
C427_0347 CDS
T02535
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03030
DNA replication
gps03430
Mismatch repair
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C427_0347
03430 Mismatch repair
C427_0347
03440 Homologous recombination
C427_0347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_0347
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_0347
Enzymes [BR:
gps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C427_0347
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C427_0347
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C427_0347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGH42457
UniProt:
K6YY06
LinkDB
All DBs
Position
334668..335219
Genome browser
AA seq
183 aa
AA seq
DB search
MGDRAIEIGAVRLERGQVVDRFQALMNPGKPVSAFIENYTGITNRMLNRAAPCDEVMHEF
SDFMGDSNLVAHNASFDKRFLDAELGRICRSYDGHFACSLLVARRVYQQAPNHKLGSLIA
YKNIPSEGGFHRALYDSEMTAKLWMAMLDDISQIITTKVVPFRLIQKLSKTPKSGVNTLL
LAQ
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatagagccattgaaataggggcggttcgtcttgagagagggcaggtggttgat
cgttttcaagcattaatgaatcctgggaaacctgttagtgcatttattgaaaattatact
gggatcactaaccgcatgttaaaccgagccgctccctgtgatgaagtcatgcatgagttt
tctgattttatgggagacagtaatttggttgcccataatgcgtcatttgataaacgtttt
ttggatgcagagttaggtcggatttgtaggtcgtatgatggtcattttgcttgctcttta
ttggtggccaggcgtgtatatcagcaagcgcctaatcataagctaggttcactgattgct
tataaaaacattccatcagagggtggctttcaccgagcgttatacgattcagaaatgacc
gcgaaattgtggatggctatgctggatgatatttctcaaataataacaaccaaagtcgta
ccgtttagattaattcaaaagctctctaaaacacctaaaagtggggtgaatacattgttg
ctagcacaataa
DBGET
integrated database retrieval system
