Gossypium raimondii: 105763905
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Entry
105763905 CDS
T04129
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1 isoform X2
KO
K03255
protein TIF31
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gra03012
]
105763905
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105763905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
CLU_N
TPR_2
TPR_9
TPR_MalT
CLU
TPR_8
Motif
Other DBs
NCBI-GeneID:
105763905
NCBI-ProteinID:
XP_012437765
UniProt:
A0A0D2SZL1
LinkDB
All DBs
Position
12:36907569..36923535
Genome browser
AA seq
1866 aa
AA seq
DB search
MAPRNSRGKAKGEKKKKEDKLLPLAMDITVHLPDETHVILKGISTDKILDVRRLLSVKTE
TCHVTNFSLSHEVRGPRLKDAVDVSALKPCVLTLTEEDYDEDGAVAHVRRVLDIVACTTC
FGPSATAKDQIKPDASKNAPAAGEKGGVAAKKTAASTNKESLSKSPAKDVPVYVDGEISH
SRPKLGSFYEFFSLSHLTPPLQFIRRTAKRHVEEIATDDHLFSLEVKLCNGKLVHVEACR
KGFYSVGKQQILCHNLVDLLRQLSRAFDNAYADLMKAFLERNKFANLPYGFRANTWLVPP
IAAQSPSNFPPLPTEDETWGGNGGGLGRDGKNDLIPWANEFSFIASMPCKTAEERQIRDR
KAFLLHSLFVDVAIFRSIKAVKHVTEKLSPSSINNDEPLYSKRVGDLNIMVMKDASNASC
KVDTKIDGIQAIGDQKNLLERNLLKGITADENTAAHDISTLGVLNVRYCGYIATVKVERR
ENQQSSHPSQSIELEQPEGGANALNINSLRLLLHKTKPSEPNKPASPSKILEHEEPSSSQ
ISVEGLLEESIAKLEEEELKQEPFVRWELGACWIQHLQDQKNTEKDKKPSRERPKNEMKV
EGLGTPLRSLKNKKKTDGNVGSVNSNSHPGAVEKVTGAPMESTLQTNSRDGELVLKSKLS
EEAFARLKESDTGLHCKSLQELIDLSQKYYTEVALPKLVADFGSLELSPVDGRTLTDFMH
TRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHVVQAVIATVDNSDKMAESIASAL
NLLLGVPDNGELHKSCRIHSLVWKWLQLFLMKRYEWDISNLDFNEIRKFAILRGLCHKVG
IELVPRDFDMDSPTPFRPSDVVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTY
GTKALSKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPD
TMKSYGDLAVFYYRLQHTELALQYVKRTLYLLHLTCGMSHPNTAATYINVAMMEEGLGNV
HVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKL
GPDDLRTQDAAAWLEYFESKAFEQQEAARNGTKKPDASIASKGHLSVSDLLDYINPNHDA
KGKGIVAGKRRSFVMKVKGKVHPERSEDSPKEAAKEDSDEEKQFPEQEDKPDANQQTSTV
TLQPHAPVAEETTEAKINVDNHIHSELHAEGDDGWQHVQRPRASASHGGRRLKQRRATIG
KVFSYQKKNVDPHVEFPLVKATNQNSRFYLLKKRTISHGAYTEQHTMSPSQGSKFGRGII
RTVAYRVKSTPSSKSSAKVSGNGGEVLNSSGGSASTFAPNDLRPTKNSLVSLGKSPSYKE
VALAPPGSISKLHIRPETDCHDSQEAPDHNAEHHQDEINEAKDSFDQVTTGTENISKEKN
ENALLDSTDSSKEEIDAVETKETRSPSVMEDNSSLVVTEREEGQELEVGGDEAREVIQDG
IYINCMPSSIDSPEKEFSEKDLSPSFEPHSISSSALQGVEELKEKPLVLTSGNGQGLTNR
KLSASAAPFNPSTPIPRAAPCPVNIVLPPGPGPVPAIAPWPVNMPIHPASPPVLPNPACS
SPHHPFPSPPPTPNMMQHLPFMYPPYSQPQPVPTSTFPLTSSPFHPSQFSWQCNVGPSVP
EFIPGTVWPGHPMEFPIPSRIVEPITDQILEPKIQGDDSNPTSASMLPVDIETIGEAKEE
VNISASEAINSSNEVSRAGLESLQENGHLNHCLDNSGNKPSQYNSPNKNAGGSVERKSDD
EKTFSILVRGRRNRKQTLRMPISLLSRPYGSQSFKLIYNRVIRGSEVPKTTGLYLSDNCT
ASATAT
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaggaacagccgtggaaaagccaaaggagagaagaagaagaaagaagataag
cttcttccattagcgatggatattaccgtacaccttcccgatgaaacccatgttattctc
aagggaatatcaacggacaaaatcctagacgttcgtcgtcttttgtcggtaaaaaccgag
acctgccacgtcacaaatttttcgttatctcatgaggttagagggccgcggttaaaagat
gcggtcgacgtttcagcgcttaagccgtgcgttttaactttgacggaagaggactacgat
gaagacggcgcggtggcgcacgttagacgggtgctggatatcgtggcctgtactacgtgc
tttggtccgtcggccactgccaaagatcagatcaagcctgacgctagcaagaatgcgccg
gctgctggggagaagggcggtgtcgccgccaagaaaaccgccgccagtacgaataaagaa
tctttgtcaaaatctccagcgaaggacgtaccagtctatgtagacggcgagataagccat
tctcgtcctaagcttggctccttctatgaattcttttccctttctcatctcactcctcct
cttcagtttataaggaggacggcgaagcgccatgttgaggagatcgccactgacgatcat
ctcttctctctagaagttaagctttgcaatggaaagctggttcacgtggaagcttgccgg
aaaggattttatagcgttgggaagcagcagatcctttgtcacaatcttgttgatttgttg
cgccaactgagtagagcttttgataatgcatacgctgatctcatgaaagcatttttggaa
cgcaacaagtttgcgaatcttccttatggctttagagccaatacatggcttgtacctcca
atcgcagcacaatcaccttcaaatttcccacctcttcctacagaggatgaaacatggggg
ggcaatggaggcggtttaggaagagatggcaaaaatgatttgataccttgggccaatgag
ttttcatttattgcatctatgccttgcaagacagcagaggagaggcagataagggacagg
aaagcattccttcttcacagtctatttgttgacgtggccattttcagatccattaaggct
gtgaagcatgtaacggaaaagctgagtccaagttcaataaataatgatgaacctctttac
tccaagagagtgggggacttgaatattatggtaatgaaagatgcttcgaatgcaagctgt
aaggtggacactaaaattgatggtatccaagcaattggagatcaaaagaatttgctggaa
agaaacttactgaaagggatcacagctgatgaaaatacagctgcacacgacatttccact
ttaggtgtgctaaatgtaagatactgtggctatattgccactgtgaaagttgagaggaga
gagaatcagcaaagcagtcatccatctcaaagcattgaacttgaacagcctgaaggcggg
gccaatgccctcaatattaacagtttgagattacttcttcacaaaacaaaaccttcagaa
cccaataagccagcttcaccttcaaaaattctggaacatgaagagcctagttcttcccaa
atttctgtagagggtttgctggaagaaagtattgctaaacttgaggaagaggaactcaaa
caggaaccttttgtgagatgggaactcggagcctgctggatacaacatttgcaggaccaa
aaaaacacagaaaaagataaaaaaccatccagggagaggcccaagaacgagatgaaggtt
gagggacttgggacacctcttaggtccctcaagaacaagaaaaaaacagatgggaatgta
gggtctgtaaactcaaattctcatccaggcgctgttgaaaaagtaactggtgctcctatg
gaatctacgcttcaaaccaattcaagagatggtgaacttgtgttgaagagcaagttatct
gaagaggcctttgctcgacttaaagaatcggatactggacttcattgcaagtctttgcag
gaacttattgacttgtcacagaaatattacactgaagttgctcttccgaaattggttgca
gattttgggtctttggaactctcaccagttgatgggcggacccttactgatttcatgcat
actagaggtcttcagatgcgttctctgggacatgttgtcaagctttccgaaaagctatcg
catgtgcagtcactttgtattcatgagatgattgttcgggctttcaagcatgttgtgcag
gcagtgatagccacggttgataacagtgataaaatggctgaatcaatagcttctgcactg
aacctgctgcttggagtccctgataatggagaactacacaagtcttgcagaatccattcc
ctggtgtggaaatggttgcagctcttcttgatgaagcgatatgaatgggatattagcaac
ttagatttcaatgaaatcaggaaatttgcaattctacgtggattatgccataaggtagga
attgaattggttccacgggattttgacatggattctcctaccccgttccgaccatcagat
gttgtaagcctggttccagtccataagcaagcagcatgctcatctgctgatggaaggcaa
cttttagaatcatcaaaaacagccttagataagggaaaactcgaagatgcagtgacttat
ggaaccaaggctctgtcaaagctggtagcagtttgtggtccatatcatcgaatgacagct
ggggcttacagccttcttgctgtagttttatatcacactggagacttcaatcaggccact
atatatcagcaaaaagccttggatattaatgagagagaactaggactagaccatccagac
acaatgaagagctatggagatcttgctgtattctattacaggcttcagcatacagaactt
gctcttcaatatgtaaagcgtactttgtaccttttacatcttacttgtggcatgtctcat
ccaaatactgccgcaacatatataaatgtagccatgatggaagaaggcctgggcaatgtt
catgttgccctcagatatctacacaaagctctgaagtgtaaccaaaggttacttggtcca
gaccatattcagacagcagcaagttatcatgcaatagcaattgcgctctcattgatggag
gcttaccctttgagtgtacaacatgaacaaacaaccttgcaaattctccgagcaaagctg
ggccccgatgatttgcgtacccaggatgctgctgcatggcttgagtactttgagtccaag
gcatttgaacaacaagaagctgctcgaaatggtactaagaagccagatgcatccatagct
agcaaaggccatctaagtgtatctgatttgcttgactacattaatccaaatcatgatgcg
aaagggaagggtattgtggcaggaaagagaagaagcttcgttatgaaggtgaagggaaaa
gtccatccagaaagatctgaggattctcctaaagaagctgcaaaagaggattcagatgaa
gagaaacaattccctgaacaggaagataaaccagatgctaaccagcagactagcactgta
actttgcagccccatgctcctgttgcagaagagacaacagaggcaaaaataaacgttgat
aatcacattcattctgaattacatgctgaaggtgatgatggatggcaacatgtccaaagg
cctagagcatctgcctcacatggtggacggcgattaaagcagaggcgagcaactattggg
aaggtttttagttatcagaaaaagaatgttgatcctcatgtggaattccctcttgtcaag
gccactaatcagaatagtaggttttaccttttaaagaaacgaactatatctcatggagct
tatacagagcagcacaccatgagcccctcccaaggttcaaaatttggacggggaataatc
agaactgttgcatacagggttaagtccactccatctagtaaaagttcagctaaagtctct
ggaaatggaggtgaggtgcttaattcttcagggggatctgcttctaccttcgcaccaaat
gatctccgaccaacaaaaaattctctagtcagtcttgggaaatctccttcttacaaggaa
gtagctttggctcctccaggaagtatctccaaactgcatatcaggcctgaaactgattgc
catgatagccaagaggccccagaccacaacgctgaacatcatcaagatgaaattaatgag
gcaaaagacagttttgaccaggtgactacagggactgaaaacatatctaaagagaagaat
gaaaatgctttgttggattcaactgatagttcaaaagaggaaattgatgcggttgaaacc
aaagaaactaggtcaccttctgtgatggaagataactcttccttggtggtgactgagaga
gaggaaggacaagaacttgaagttggtggtgatgaggctcgtgaagttatacaggatggc
atatacataaattgcatgccgagttcaattgattctcctgaaaaggaattctctgagaag
gatttgtctccaagttttgaaccccatagtatttcaagttccgcattacaaggggtagaa
gaattgaaggagaaacccttggtcctaacttccggtaacggtcagggactaaccaatagg
aagttgtctgcctctgcagctcctttcaacccatcaacacccattcctcgtgctgcacca
tgccccgtgaacatcgtccttcctcctggacctggacctgttccagccattgcaccttgg
ccagtgaacatgcctattcatcctgcatctcctcctgtcttaccaaatccagcatgctct
tcccctcaccatccatttccttcacctcctccaactccaaacatgatgcagcatctaccc
tttatgtatccaccctattctcaaccccaacctgtaccaacaagcacctttcctctaact
agtagcccttttcaccccagtcaattttcatggcagtgcaatgtgggccccagtgtacca
gagttcattccggggacagtttggcctggtcatccaatggagtttcccataccatcacgg
attgttgagccaattactgatcagatattggaaccgaaaatccaaggtgatgattctaac
cctacttcagcttcaatgctgccggtagatattgagactattggagaagctaaggaagaa
gtcaacatttcagcatctgaagcaataaatagttctaatgaagtatctagagctgggttg
gaaagcctgcaggaaaatggtcacttgaaccattgtctagacaactctggaaataaaccg
agccaatacaacagcccaaacaaaaatgctggaggcagtgttgaaaggaagagtgatgat
gagaaaaccttcagcattttagtaagaggtagaaggaaccgaaagcagacgttgagaatg
ccaatcagtttacttagtcgaccatatggctcgcagtcttttaaacttatatacaataga
gttatcagagggagtgaagttccaaaaactactggcctttatttgagtgataattgtaca
gctagtgccacagccacatag
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