Gossypium raimondii: 105765631
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Entry
105765631 CDS
T04129
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105765631
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105765631
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105765631
03036 Chromosome and associated proteins [BR:
gra03036
]
105765631
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105765631
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105765631
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105765631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDS5
Htt_N-HEAT_1
Adaptin_N
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
105765631
NCBI-ProteinID:
XP_012440283
UniProt:
A0A0D2T8P3
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Position
12:complement(56804095..56810505)
Genome browser
AA seq
588 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCIVEETCVRDKAVESLCRIGAQMREQ
DLVEFFIPLLKRLAAGEWFTARVSSCGLFHIAYPSAPEALKTELRTLYGQLCQDDMPMVR
RSAATNLGKFAATVEAPHLKVDIMSMFDDLTHDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNSELAIQNILPCVKELSTDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAVSLLAPVMGKDITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRYFATQALQSSDQQMMMSS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatcgatgagcctttgtatcccattgcggtgttgatagatgagctaaaaaat
gaagatatacagcttcgtttgaactcgatccgtaagctttctacgattgcacgtgccctt
ggggaagaaaggactcgaaaagaattgattccgtttcttagtgagaacaatgatgacgat
gatgaagttctccttgccatggctgaagaattgggagtttttattccttatgttggaggt
gtcgaacatgctaatgttttgttgcctccgttggagactctttgcattgttgaggaaact
tgtgtgagggataaggctgttgagtcgttgtgtagaattggtgctcaaatgagagagcag
gacttggttgagttctttattccattgttgaagagattggctgctggtgagtggtttaca
gctcgagtttcctcttgtggattgtttcatattgcatacccaagtgccccagaggcactg
aaaactgaattaagaacattatacggtcaactttgccaagatgacatgcccatggttagg
agatctgctgcgacaaatcttggaaaatttgctgctactgtagaagcacctcatttgaag
gtggacattatgtctatgtttgatgatttgacgcatgatgatcaagattctgtccgattg
ttagctgttgagggctgtgcagctcttggaaagttgttggaaccccaagattgtgtcgct
cacattctccctgtcatagttaatttctcacaggacaagtcttggcgtgtccgttacatg
gtcgcaaatcagttgtatgagctgtgtgaagctgttggtcctgagcctactaggtcggac
ctagtacctgcatatgttcgcctacttcgtgataatgaagctgaagtccggatagctgct
gctgggaaagtaactaaattttgccgaattctgaattcagaattagcaattcagaacatt
cttccttgtgtcaaggaactatcaacagattcatcccaacatgtccgttctgctttggct
tcagttataatgggaatggcgcccattttggggaaggatgcgaccatagaacaattgctt
cctatatttctttctcttctaaaagatgaatttccagatgtccgactgaatatcattagc
aagcttgatcaagtcaaccaggtaattggaattgatttgctgtcccagtccctattgcct
gcaattgtggagctcgcagaggataggcactggagggttcgacttgcaataatagaatac
atacctttattggcaagccaattgggtgttggcttcttcgatgacaaacttggtgcactc
tgcatgcaatggttaaaagataaggtttattctatccgtgatgctgctgctaataacgtt
aagcgcctcgcagaagaatttggacccgattgggcaatgcagcacatagttccacaggtt
ttggacatgataaacaacccgcattatctatatcggatgaccattctacacgcagtttct
ctacttgcccctgttatgggaaaagatattacttgttcaaaacttctgcccgtggttatt
aatgcttctaaagatagggttccgaacatcaaatttaatgtcgccaaggtgttgcagtca
cttatccctattgttgatcaatctgtggtggagaagacaattcggccatgcctagttgaa
ctaagtgaggatccagatgttgatgtcaggtatttcgccacccaagctctacaatcaagt
gatcagcaaatgatgatgtctagctag
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