Gossypium raimondii: 105768517
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Entry
105768517 CDS
T04129
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105768517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768517
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105768517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
SET1_RBD
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105768517
NCBI-ProteinID:
XP_012443927
UniProt:
A0A0D2V258
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All DBs
Position
5:complement(56133474..56136459)
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AA seq
471 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKEYFGKYGEVVEAMIMRDRVTGRARGFGFVVFADSAVA
ERVIMDKHMIDGRKVEAKKAVPRDDQIVLNRNVVGVTGSTGIGQTKKIFVGGLASTVTEV
DFKNYFDQFGKITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKLVEVKR
AVPKELSPGVTNRNVVGYNYGLNRASNFLNSYAQGFNLSPIGGIGVRMDGRFNPLASRQN
GFSPFSTTGYGIGMNMEPGMSANYGGNSNFGNSLGYGQIISPYYGGNSNRYNTPIGYGVG
SGRNDSVLSPATRNVWGNVGLSNATNASSPASYLGSGNGSFGSLGNSGANWRPSLPARSG
GNASGYTGGSADDNYSLGGGGYGRNIGIVAAPPSSFAGSTGNIEGSYGDLYRNASVYGDS
TWKFASPDLDGSSSFGYGLGNTSADVTTRPSEDYVGSYNVASRQSNRGIAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgatcttggtaaactcttcattggtgggatatcatgggacaccgatgaggaa
cgtcttaaggagtatttcggaaagtacggggaagtggtggaggcaatgatcatgagagat
cgtgtcactggccgtgcccgtggctttggtttcgttgtctttgccgattctgctgttgct
gagagggtaattatggataagcatatgatcgatggtcgcaaggttgaggcaaagaaggct
gttcctagggatgatcaaattgttctaaaccggaacgtggttggtgtcactggatctacc
ggtattggacaaacgaaaaagatttttgttggaggtttggcatctaccgtcaccgaggtt
gactttaagaactactttgatcaatttggtaaaattactgatgttgtggtgatgtatgat
cataatacacaaaggccgagagggttcggcttcatcacctatgattcggaagaagcagta
gacaaagtcctacataaaacatttcacgaactcaatgggaaattggttgaggtcaagaga
gcagttcctaaagaactatctccaggtgttaccaaccgcaatgttgttggatataattat
ggtttaaatagggcttccaacttcctcaatagttatgctcaaggatttaatctaagtccc
atcggaggcattggagttaggatggatggtaggtttaatcctctcgctagtaggcaaaac
gggttttctccatttagtaccactgggtacggaattggtatgaatatggaaccaggaatg
agcgcgaactatggtgggaattctaactttggtaacagtcttggatacggacagataatt
agtccgtattacggtgggaattcaaacaggtataatactccaattggttatggtgtcgga
agtggaagaaacgattctgttttgagccctgctactcggaatgtttggggaaatgtaggc
cttagcaatgctacaaatgcttccagtcctgctagttacttagggtctggaaatggtagt
ttcggttctttaggaaatagtggggcaaattggagaccttctcttcccgctcgaagtgga
gggaacgcttctggttatactggtgggagtgccgatgacaactacagtttgggagggggt
ggatatggaagaaacatcggcattgttgcagcaccaccatcatcatttgctgggtcaact
ggtaatattgaaggctcctatggagatctttaccgtaatgcttcagtttatggtgactca
acttggaagtttgcatcacctgacttggatggatctagctcgtttggttatggacttggc
aatacatccgcagatgttactacaagaccctctgaggattatgttggaagttacaatgtc
gcaagtagacagtccaatagaggaattgctgcctag
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