Gossypium raimondii: 105768821
Help
Entry
105768821 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105768821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105768821
03009 Ribosome biogenesis [BR:
gra03009
]
105768821
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105768821
Spliceosome [BR:
gra03041
]
Complex A
U1 snRNP components
U1 related factors
105768821
Complex B
105768821
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Helicases
105768821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105768821
NCBI-ProteinID:
XP_012444483
UniProt:
A0A0D2PX89
LinkDB
All DBs
Position
7:complement(1611045..1616225)
Genome browser
AA seq
655 aa
AA seq
DB search
MASTATASSAGPRYAAPDPTLPKPWKGLVDGKTGYLYFWNPVTNVTQYERPTSADSVPKP
SVAPISSSVQVQQSSEGRCGYSPGKENDRDGRGSEAKLEPVSRTDQNARSGPVHSHNTPN
VTSSSVSGVSSARGHGSVTGGSNLSGDAYRRQHEITVTGDEVPPPFSSFESTGFPSELLR
EVHNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLVPGFMHIKRCGNDSQMGP
TVLVLSPTRELATQIQDEAQKFGGSSRITCTCLYGGAPKGPQLREIERGVDIVVATPGRL
NDILEMRRVSLQQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPREVRK
IAADLLVNPVQVNIGNIDELVANKSITQNVEVLAPMVKHRRLEQILRSQEPGSKIIVFCS
TKKMCDQLARNLSQFGAASIHGDKSQADRDYVLGQFRSGRSPVLVATDVAARGLDIKDIR
VVINYDFPTGVEDYVHRIGRTGRAGATGLAFTFFGDQDSKHASDLIKVLEGANQQVPAEL
REMASRGGGMGRPRRWAPSSGGYDGERGGRTDSGYGGRDGGRGGRGISTSSSWHEKSGGR
GYGHESSDRNDCGFHDSYDTGRSRSRSPDRFNSASGRDHSPVLSFHELMMKRNQQ
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactgcaactgcctcttctgctggtcctcgttatgctgcgccagaccccacc
ctacccaaaccatggaaaggcctagttgatggtaaaactggttatctatacttttggaat
cctgtaacaaatgtcacgcagtatgagaggcctacaagtgcagattctgtcccgaaacct
tctgttgcacctataagttcttcagttcaagttcagcaatcttctgaaggacgttgtggt
tatagtcctggcaaagaaaatgaccgggatggaagaggaagtgaagccaaacttgagcca
gtatcaaggactgaccagaatgctagaagtggaccagttcattcccataatacgcctaat
gtgacttccagctctgtgtcgggagtatcttctgctagaggacatggatcagtgactggg
ggaagtaatttgtctggtgatgcttatcgccgtcagcatgagataacagtaactggagat
gaggtgcccccacctttttcatcatttgaatctactggatttccttctgagttacttaga
gaggtacacaatgctgggttttctgctccaactccaattcaggctcaatcatggccaatt
gcattgcaaggtagagacatagtggccattgcaaaaaccggttctgggaaaacattgggt
tacctagtacctgggtttatgcatatcaagcggtgcggtaatgattctcaaatgggtcca
actgtgttagtattatcaccaacaagggagctggctactcagatacaagatgaagctcag
aagtttggtggttcatcaagaattacgtgcacatgtctgtatgggggagcaccaaaaggt
cctcagttgagagaaattgagagaggagtagatattgtggttgccactcctggccggtta
aatgatattctagagatgaggagagtcagcctccagcaagtttcttacctcgtgttagat
gaggctgatcgcatgttagatatgggttttgaacctcagattaggaagattgtgaaagag
gtgcctactcgtaggcagactctaatgtacacagcgacatggccaagggaagttcggaaa
attgcagcagatctactggtaaatcctgttcaggtcaacattggcaatatcgatgagctt
gtggcaaacaagtctattacacagaatgtcgaagtattagcaccaatggtaaaacacaga
agacttgagcagattctgcgctctcaagaaccaggatccaagattatagtcttttgttca
accaagaagatgtgtgatcaacttgctcgcaacctcagtcagtttggagctgcttctatc
catggtgacaaatctcaggctgacagggactacgtgcttggtcagtttcgctctgggagg
tcgccagtgcttgttgctactgatgttgctgctcggggcctagacattaaggacatcagg
gtggtaatcaactatgacttccctactggagttgaggattatgttcataggattggaagg
actggaagggcaggtgcaactggattggcttttacattctttggtgatcaggattcgaag
catgcttcagatctcatcaaagttttagaaggagcaaaccagcaggtgcctgcagaactt
cgtgaaatggcttcacgtggtggtgggatgggaaggcctagacgatgggctcctagttct
ggtggctatgatggtgaacgtggcggacgcactgattcagggtatggtggtagggatggt
ggaagagggggtcgaggaatttctacatcctcgagctggcatgagaaaagtggtggacgt
ggatatggtcacgagtcttctgacaggaatgattgtggtttccatgatagttatgatacg
ggacgcagtcggagtcggagtcctgacaggtttaatagtgcttctggacgtgatcattcc
ccagtgctcagtttccacgagctgatgatgaaacgtaatcagcagtag
DBGET
integrated database retrieval system