Gossypium raimondii: 105776939
Help
Entry
105776939 CDS
T04129
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105776939
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105776939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
105776939
NCBI-ProteinID:
XP_012455370
UniProt:
A0A0D2T1B1
LinkDB
All DBs
Position
10:complement(1874880..1877854)
Genome browser
AA seq
660 aa
AA seq
DB search
MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS
GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ
LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA
AAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSES
ESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEELI
VGCFVRVGIGRSKTGAIYRLCMVRNVDATDPDRTYKLENKTTYKYLNVVWGNESSAARWQ
MAMISDSPPLEEEFRQLIREVERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQE
KKSSSSRPLNVAAEKDRLRRDLEIAQSKHDDVEVERIKKRLQQLEASRQSQEKDAKAVRL
AEMNRKNRVENFKNASGLKPVNTGLKAGEAGYDPFSRRWTRSRNYYNAKAPGGDAAAVAN
GDTNGAIGSGNGNDAGAAAAEAGRAATAAALQEAAGAGKLVDTNAPVDEGTESNMLHDFE
LPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttagaaaatttgcttcttgaggcagcgggaagaactggtactggaggaagg
aaccgacattcgcttccaccatctagaaggcgacgtgaaggttcatattcagatggggga
agtgactctagggatgatgattcggatgatgatcatgggtatgcaagtagaaaaccgtct
ggttcacaagttccattgaagaagaggttagaccctgctgaaagagatgatgatcagggc
agtcaggaagaaggtgattataatgatgctggttctggtcgagagcgtgacagcagtgat
gaatctgatgttggtgacgatctttacaagaatgaggaagacaggagacagcttgcgcag
ttgactgaactggaaagagaaatgattctgtcggaacgagcagataagagaggtgataag
aaatttactgagaagattagatcgaagcgggaaaacgataggcctagccggtcacagaga
gagactccacctcttccttctcgtggagtgcggtcatcggctagatctgcggatagggct
gctgctaaagatgatgctctgaatgagttgagagcaaaacggctgaagcagcaggatcca
gaggcacatcgtaagttgagagatgcatctagaggcagttctggcaaccggggcttatca
ccagtcaagaggaaacccttcactgcatcaagtctaagtagctctagtcagagtgagagt
gaaagcaggtctaacagtgaagacgaagggtcaactggggatggcggaatggttgatagt
gaggatgagaggggcacatgggggccaaatgggccaacatttaatgacattaaggaaatt
actatcagaaggtcaaaacttgcaaaatggttaatggagccatttttcgaagagttgatt
gtgggttgttttgtaagagtcggcattggaaggtcaaaaactggcgctatctacaggctc
tgcatggtcaggaatgttgatgccacggatcctgatcggacatacaaactagagaacaag
acaacatataagtacttgaatgtggtttggggaaatgaaagctctgctgccaggtggcag
atggctatgatttcagactccccaccgctagaggaggagtttagacaattaattagggag
gtggagcgaagtggaggccggatgccgagcaagcaagatgtgcttgaaaagaaagaagcg
ttacagaaggccaaaacttttgtctactcagcagctaccgtaaagcagatgttgcaggag
aaaaagtccagttcatctagaccgttaaatgttgcagctgagaaggaccgactgagaagg
gacctagaaattgcacaaagcaagcatgatgatgtagaggttgagaggattaagaagaga
ctgcagcaactagaggcttcccggcagtcacaggagaaagatgccaaggctgttaggttg
gctgagatgaaccgaaagaacagagttgagaatttcaaaaatgcatccgggttgaaacct
gtaaatactggtttaaaagcaggggaagctgggtatgatccattttcgaggaggtggact
agatcaaggaactactataatgcaaaggctcctggaggagatgcagcagcggtagctaat
ggtgacacaaacggtgcaattggcagtggaaatggcaacgatgcaggggctgctgctgct
gaggctggcagggcagccacagcagctgccttgcaagaagctgcaggtgcggggaaattg
gttgacacaaatgcccctgtcgatgaagggacggaatctaacatgctacatgactttgag
cttccaatctcattggacgtgcttcggaagttcggcggtcacgagggcgcggtggctgga
ttcatggccaggaaacaaaggatagaagcaaccgtcggatgccgagttcccgagaatgat
ggaaggagacatgctcttaccttgacagttagtgactacaagagaagaagaggtctcctt
tag
DBGET
integrated database retrieval system
