Gossypium raimondii: 105777045
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Entry
105777045 CDS
T04129
Name
(RefSeq) pre-mRNA-splicing factor 38 isoform X2
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105777045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105777045
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105777045
Complex C
U4/U6.U5 tri-SnRNP related factors
105777045
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
105777045
NCBI-ProteinID:
XP_012455549
UniProt:
A0A0D2USY9
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Position
10:16970968..16974121
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AA seq
377 aa
AA seq
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MANRTDPAAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNDDYKYVRVLGAFYLRLTGIDSDIYRYL
EPLYNDYRKVRRKSPDGNFMLTHVDEVIDELLTRDYSCDIALPRIKKRWTLESLGVLDAR
KSVLEDDFEEEEEKDEMEQDGLEEEVAHEKDYYRARSPARERERDWRRDSHRHRDRDYDR
DRDYDRERGRGRDRERDRDRDRDRDRDRYRLREEKEYGYERERDREREGRERDRRDRERG
RRRSRSRSRSRERKRHGRSSMSPRRHEAEDGNAPEESKKKGKKEKKEKKDDGTDHPDPEI
AEANRIRASLGLKPLKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgtacggacccggcggcaaagagcattaggggaaccaaccctcagaatctg
gtcgaaaagatcgtgcgctcgaagatataccagaatacgtactggaaggagcagtgtttc
ggtctgacggcggagacactagttgacaaggcaatggagctcgaccacatcggcggaact
tacggcggaaatcggaagcccactcctttcatgtgcctcgtcatgaaaatgcttcaaatc
caacccgaaaaggatattgtcgtcgaattcatcaaaaacgacgattacaagtatgtacga
gttctgggagctttttatctgcgtcttacggggatcgattccgatatttatcgttattta
gagcctttgtacaacgattatcggaaagtaaggcgaaaatcacctgatggaaatttcatg
ttgactcatgttgatgaggttattgatgaacttctcactagagattactcctgtgatatt
gctctaccacgtattaagaaaagatggactcttgaatcgcttggtgtactggatgcaaga
aaaagtgtgctggaagatgattttgaggaagaagaagagaaggatgagatggagcaagat
ggtttagaagaggaggtagctcatgaaaaggattattaccgagcgagaagccctgctaga
gagagagaaagggattggagacgtgacagtcatagacacagggatcgggattatgacaga
gatagagactatgatagagaaaggggacgtggccgtgacagagagagggacagagatagg
gatagggatagggatagagatcggtatcgcctgagagaggaaaaggagtatgggtatgag
agggagcgagatagagagagggaaggtagggagcgtgataggcgagacagggagcgtggc
agacgaaggagccgttcaaggagtaggagtagggagcggaagagacatggtcgcagtagt
atgagtccgagaaggcatgaagcagaggatggtaatgctccagaagagtcaaagaagaag
ggaaagaaagaaaagaaagaaaagaaggatgatggaacggaccaccctgatccagagatt
gctgaagccaacaggattcgagcatccctaggtttgaaaccattgaaattgtaa
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