KEGG   Gossypium raimondii: 105778419
Entry
105778419         CDS       T04129                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105778419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105778419
   03041 Spliceosome [BR:gra03041]
    105778419
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105778419
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105778419
Spliceosome [BR:gra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105778419
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 105778419
NCBI-ProteinID: XP_012457569
UniProt: A0A0D2R1K1
LinkDB
Position
1:complement(5431846..5435216)
AA seq 438 aa
MQYMDPTKKRKLDENGTVSAQSEPDPITKLTPQDGRKLIERFTVDQLLDILQDAVCRHVD
VLSAVRSIADQDPSQRKLFIRGLGWDTTTDGLRSLFSVYGELEEAVVILDKTTGKSKGYG
FVTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNSATNSNPVDIHMRKIYVANVPYDMP
ADKLLGHFSQYGEIEEGPLGFDKQTGKSRGFALFVYKTAEGAQAALAEPVKNIDGRQMNC
KLAIEGKKGKQGQDGMMQSGGGVPGNAEMGMGGHGGGYGGPGGYGGFSGGMQGPPGPMGH
PHPLNSSGVGVGALSGNGGVAAGGYSGLGGPYGGYGGQGSTGYGGPGSAGYGGPGSTVYG
GLTGAGAGGGLGAASGGSSLYRMPPSSAGMPTGGYPETAHYSLSSSAAFPSQLHQGAGTS
PAPRVPPGAMYPNGPPFY
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgcaatacatggatccaactaagaaacgcaagttagatgaaaacggtactgtttcagcg
cagtcggaacctgaccctatcaccaaactaaccccacaagatggccgcaaacttattgag
cgattcaccgtcgaccaactcctcgacatcctccaagacgccgtttgtcgtcacgtcgac
gttctttcagccgttcgatctattgccgatcaagatccgtctcaacggaagctcttcata
cgtgggttgggttgggataccacaactgatggccttcgttcactcttttcggtatatgga
gaacttgaagaagcggttgttatcctcgacaagactaccgggaaatcgaaagggtacgga
tttgttacgtttaagcacgtagatggtgctttgcttgctcttaaagaacccagtaagaaa
atcgacgggagagtcaccgtgacacagctggcggcggcagggaattcggcgacgaatagt
aacccggtggatattcatatgaggaagatttatgtagccaatgtaccgtatgatatgccg
gcggataagttattgggccatttttctcagtatggggaaatagaagaggggcccttgggg
ttcgataagcagacggggaaatcaaggggttttgctcttttcgtttataagacagcagaa
ggggctcaggcagcgttagcggagcctgtaaagaacattgatgggagacaaatgaattgt
aagctggctattgaagggaaaaaagggaagcaaggacaagacgggatgatgcaaagtggc
ggtggggttccgggaaacgcagagatgggaatgggaggacatggtggaggatatggtggg
ccgggaggttatggtgggttttcaggtgggatgcaagggccgcctggtcctatgggtcat
cctcatcccttgaattcatcaggagttggagtgggcgctttgagtggaaatggcggtgtt
gctgctgggggttattctggacttggtgggccgtatggtgggtatggtggacaaggttca
actggctatggtggaccaggatcagctggctatggcggaccaggttcaactgtttatggt
gggttgactggtgctggtgcggggggtgggttgggtgctgcaagtggagggtcttcattg
tatagaatgccgccgagttcagctgggatgccaactggtggttatccagagactgctcat
tatagcttgtcttcctcggctgctttccctagtcagcttcaccaaggggctgggacatcc
cctgcgccaagagttccacccggtgcaatgtatcccaatgggccaccgttctactga

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