Gossypium raimondii: 105782094
Help
Entry
105782094 CDS
T04129
Name
(RefSeq) probable CoA ligase CCL12 isoform X1
Organism
gra
Gossypium raimondii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ACAS_N
Motif
Other DBs
NCBI-GeneID:
105782094
NCBI-ProteinID:
XP_012462036
UniProt:
A0A0D2W976
LinkDB
All DBs
Position
13:57059237..57065044
Genome browser
AA seq
738 aa
AA seq
DB search
MTTTATAKTINEVGIDDLYRAGGGILTIDEAKHIHQIIKQAISKAKRSRLSAAEVWKEVV
GKKVLKPNHPHSLHQRVYYSVYADWDTSINGPPLYWFPSLQDSKLTNLGKIMEIHGPKLL
GTSYKDPIASFNLFREYTVRHPEVYWSIILKELSVTFHEPPKCILDTTDKSRPGGTWLPG
SVLNIAECCLLPLIHPRKEDDSCAIVWRDEGDDDDSDVNRITLKQLREQVILVANALDRT
FTKGDAIAIDMPMTVNAVIIYLAIILAGCVVVSIADSFAAKEIATRLRVSKAKAIFTQDF
IVRGGRKFPLYSRVVEASPHKVIVLPVSGRNVGVQLREQDISWKDFLAYDNQHQRPNHFT
PAYLPVDSMINILFSSGTTGEPKAIPWTQLSPIRSTAEGWAHINVGVGDVYCWPTNLGWV
MGPILLFSCFLTGATLALYHGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKNTDCIKGLD
WTKIKSFASTGETSNVDDDLWLSSKSYYKPIIECCGGTELASSYIQASPFQPQAFGAFST
ASMTTGLVILDEHGVPYPDDKACFGEVGLFPLYLGATDRLLNADHNDVYFKGMPTFKGMR
LRRHGDILKRTVGGYIVVQGRADDTMNLGGIKTSSVEIERVCDRADESILETAAVSVAPP
DGGPELLVIFVVLKKGFNQQPEKLKTIFSKAIQTNLNPLFKVSNVKIIPEFPRTASNKLL
RRVLRDQIQHELSVRSRM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacgactacggcgacggcaaagaccataaacgaagtgggcatcgacgatttgtaccgt
gcaggcggaggaatattaaccatagatgaagccaaacacatccaccaaatcattaaacaa
gccatttcgaaagctaaaagaagccgattatcagcagcagaggtgtggaaagaggtggtg
ggtaagaaggtgttaaagccaaaccacccacattcacttcaccagcgtgtttattactct
gtttatgctgattgggatacttccattaatggtcctcctctttattggttcccttctctg
caagactctaagcttacaaacctaggaaaaataatggaaattcatggtccaaagctttta
gggacttcatacaaggatcccattgctagtttcaatctcttccgggagtacaccgtccgc
catcccgaggtatattggtcaatcattctaaaagagctatcagttacatttcatgaacct
cccaagtgcattctggatactactgacaaatcaagaccaggaggaacttggcttcccggt
tcggttttgaatattgctgagtgttgcttattacccttaattcatcccagaaaagaagat
gatagttgtgcaattgtatggagagatgaaggtgatgatgatgattccgatgtgaaccgt
ataacacttaaacagcttcgagaacaagtcatcttggtggcaaatgcattagatagaact
ttcacaaagggtgatgcaattgctattgatatgccaatgacagtcaatgcagttattata
tacctagcaataatattagctggatgtgttgttgtatctatagctgatagctttgctgct
aaggaaattgcaacacgtttacgtgtctctaaggcgaaggctatcttcactcaggacttt
atagtaagaggaggtcgaaagtttcctttatacagtcgagttgtggaagcttctccacat
aaagtaatcgtgctccctgtgtcggggcgtaatgttggcgttcaattaagagaacaagat
atatcatggaaagactttcttgcctatgataatcagcatcaaaggccaaatcatttcact
ccagcttatctaccagtagattccatgattaacatactattctcgtccggtaccacagga
gaaccaaaagctattccatggacacaactttcgcctattcgtagtactgctgagggatgg
gctcacattaatgtcggagtcggagatgtttattgttggcctacgaatctaggatgggtg
atgggaccaattttactcttctcgtgttttctaactggtgcaacccttgctctctatcat
ggatctcctttgggccgtggttttggaaaatttgttcaggatgcaggagtaactgtttta
ggcacagttccaagtttagtgaaaacttggaagaataccgactgtattaaaggcttagac
tggacaaagataaaatcttttgctagcactggagaaacctctaatgttgatgatgacctt
tggctttcctcaaaatcttactacaagcctattatcgaatgttgtggaggcacagaatta
gcctcaagttacatccaagcaagtccgtttcagccacaagctttcggagcatttagtact
gcatcaatgacaactggtttagttatcttggatgaacatggagttccctatccggatgat
aaagcttgttttggtgaagttggtttattccctctctacctaggagcaactgatagattg
cttaatgccgatcacaacgacgtctacttcaagggaatgcctacatttaagggaatgcgt
cttaggagacatggggatatcctcaagagaactgttggtggctatattgttgttcaagga
agggctgatgacacaatgaatcttggtggaattaagacaagctctgttgaaattgaacgt
gtttgtgaccgtgccgatgagagcatcttggagactgccgcagtcagtgtagcaccaccg
gatggtggtcccgaacttttggtgattttcgtggttctaaaaaaagggttcaatcaacaa
ccggagaagttgaagacgatattctcgaaagccattcaaaccaacctcaaccctttgttc
aaggtgagcaatgtgaagataatcccagagtttcctagaacagcttctaacaaattgctt
aggagagtgttgagggaccaaatacagcatgaactgtcagttagaagcagaatgtga
DBGET
integrated database retrieval system
