Gossypium raimondii: 105783421
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Entry
105783421 CDS
T04129
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105783421
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105783421
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105783421
03036 Chromosome and associated proteins [BR:
gra03036
]
105783421
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105783421
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105783421
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105783421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
CLASP_N
Cnd1
DUF3102
Motif
Other DBs
NCBI-GeneID:
105783421
NCBI-ProteinID:
XP_012464319
UniProt:
A0A0D2VCA7
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Position
13:complement(11056500..11063015)
Genome browser
AA seq
587 aa
AA seq
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MSTVEAPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRSELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLTPLETLCTVEETCVRDKAVESLCKIGSQMREN
DLIEWFTPLVKRLAAGEWFTARVSACGLFHIAYPSAPETLKTELRSIYGQLCQDDMPMVR
RSAASNLWKFAGTVESAHLKADIMQMFEDLTQDDQDTVRLLAVEGCAALGKLLEPQDCAA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPIRTDLLPAYVRLLRDNEAEVRIAA
AGKVTKFCQILSPELAIQHILPCVKELSLDSSQHVRAALASVVMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLANQLGVGFFDDKLGGLCMQWLQDKVYSIRDAAANNLKRLAEEFGPDWAMQHIIPQV
LEIANDSHYLHRMTLLRAISLLGPVLGSEITCSKLLPVVVNASKDRVPNIKFNVAKVLQS
LISVVDQSVVEKTIRPCLVELSEDPDVDVRYFAVQGLQSIDQVTMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggttgaagcaccactgtatccaatagctgtcctgatagatgagctaaaaaat
gacgatatccaacttcgtttaaactcgatccgtaggctttcgacaattgcacgtgctctc
ggggaagagcgaaccaggtcggaattaattccatttctcagtgaaaacaatgatgatgac
gatgaggtgcttcttgctatggctgaggagctgggagtgtttattccctatgtcgggggt
gttgagcatgcccatgttttgctgacgcctttggaaaccctttgcactgttgaggaaacc
tgtgtaagggacaaagctgttgagtcattatgcaaaattggatctcagatgagggagaat
gatttgattgagtggtttactcctttagttaagaggctggctgctggagaatggtttaca
gctcgagtttcagcctgtgggctgtttcacattgcttatccaagtgcccctgagacattg
aaaacagaattacggtcgatatacggtcaactatgtcaagatgacatgcccatggtaaga
aggtctgctgcgtcaaatctgtggaaatttgctggaacagttgaatctgctcacttgaag
gctgacatcatgcaaatgtttgaggatcttacacaagatgatcaagatacagttcgatta
ttggctgttgagggatgtgctgctcttggaaagttgttagagccccaggattgtgctgca
cgtattctccctgtaattgttaatttctcccaggacaaatcttggcgtgtgcgttatatg
gttgcaaatcaattatatgaactttgtgaagctgtgggaccagagcctattaggactgat
ttgcttcctgcatatgtgcggttacttcgtgataatgaggctgaagttcgcattgcagct
gcaggaaaagtaactaaattttgtcaaattttgagtccagaacttgcaatccaacacatt
cttccatgtgttaaggaactgtcattggattcttcccagcatgtccgcgctgctttggct
tcagttgtgatgggaatggctcctgtccttgggaaggatgcaacaatcgagcagcttctt
ccaatatttctctcccttttgaaggatgaattccctgatgtgcggctcaacataatcagc
aaacttgatcaagtgaatcaggttattgggattgatctattgtcccaatccttactacca
gccattgttgagctcgctgaggataggcattggagggttcgacttgcaataattgagtat
ataccattattggcaaatcagttaggggttgggttttttgatgataaacttggtggcctt
tgcatgcaatggttgcaggataaggtttactctattcgagatgcagctgctaacaattta
aagcgtcttgctgaagaatttggcccagattgggcgatgcagcatattattccacaggta
ctagagatagctaatgattcacactatcttcatcggatgacccttcttcgtgctatttct
ctccttggtcctgttttgggctcagaaataacatgttctaaactgttgccagttgttgtc
aatgcatcaaaagacagggttcccaatattaagtttaatgttgcgaaggttttgcagtct
ctgatttcagtagttgatcagtctgtggtggagaagacgatacgtccatgcttggtagag
ctgagtgaggacccagatgttgatgtccgttattttgcagtccaaggacttcagtcaatc
gatcaggtcaccatgtcaagctag
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