Gossypium raimondii: 105788519
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Entry
105788519 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105788519
03009 Ribosome biogenesis [BR:
gra03009
]
105788519
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105788519
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105788519
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Helicases
105788519
Pre-60S particles
105788519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Motif
Other DBs
NCBI-GeneID:
105788519
NCBI-ProteinID:
XP_012470910
UniProt:
A0A0D2QRG0
LinkDB
All DBs
Position
2:35367561..35374424
Genome browser
AA seq
622 aa
AA seq
DB search
MAVLEEKNPKSPSFEDSKKKRKRKRNRVKKSEPQITDNNTDREEDEENEEFEQENHEEDE
TETREVEIDEKKKMKMKKKKKKNKKVKGEDDEKQEKGTDDEEEEKQTTDDEGKKEEIKEK
MNSGGSGIMSTESFESLGLSEPTFKAIKEMGFQYMTQIQARAIPPLMIGKDVLGAARTGS
GKTLAFLVPAVELLYNVRFTSRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQTLGLVIG
GSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEM
KQIIKYLPKENRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGLQQGYCV
VHSSKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHAELLRYIHVDCLDIHGKQKQQKRTT
TFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGAKGNA
LLFLIPEELQFLRYLKAAKVPVKEYEFDEKKLANVQSHLEKLVASNYYLNKSAKDAYRSY
ILAYNSHSMKDIFNVHRLDLQAVAGSFCFSCPPKVNLNIDSNASKFRKKMRKVEGGARNN
FSESNPYGRQRSEDDNRQFVRY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggtactggaagagaaaaaccctaaatctccctcttttgaagatagcaagaagaaa
aggaagcgaaagcggaacagagttaagaagtcggagccccaaatcactgataacaacacg
gatagagaagaggatgaagagaacgaggaatttgaacaagagaaccacgaggaagatgaa
acggaaacgagggaagttgaaattgacgagaaaaagaaaatgaagatgaagaagaagaag
aagaaaaataagaaagtgaagggtgaagatgatgagaaacaagaaaagggaactgatgac
gaagaagaagaaaaacaaactactgatgatgaagggaaaaaggaagagataaaggagaaa
atgaacagtgggggaagtgggataatgagcacggagtcatttgagtccttaggattgtct
gagccaacttttaaagctattaaagagatgggttttcagtatatgactcagattcaagca
agagctattccaccacttatgattggcaaagatgttcttggggctgcaagaacgggttct
gggaaaacccttgctttcttggtacctgctgttgagttgctatataatgttcgattcact
tctcgtaatggaacaggtgttatcgttatctgtcccacaagagagcttgccattcagact
catgcggtagcaaaggatcttcttaaataccactctcagacccttggattggttattggt
ggttcagctagaagaggagaagcagagcggattgtgaagggcgtaaatttgttagtggct
acacctggtcggcttcttgaccatcttcaaaataccaagggattcatttacaaaaatttg
aagtgtctcatgattgatgaagctgaccggatattggaagcgaattttgaggaagaaatg
aaacaaattatcaagtatcttcctaaggaaaataggcaaactgctctattttcggctacc
cagactaagaaggttgaggaccttgctcggttgtcatttcagacaactcctatttatatt
gatgtagatgatgggcgaaagaaggtcaccaatgaagggctgcagcaaggctattgtgtt
gtgcatagttcgaagagatttatccttttgtattcatttttgaagaggaacctttcgaag
aaagtgatggtctttttctcttcatgcaactcagtcaagtttcatgccgagcttcttaga
tatattcatgtggattgccttgatatccatggaaagcagaagcagcaaaagcgaaccact
accttcttcgacttttgtaaagcagaaaagggcattttgctctgcactgatgttgcggcc
cgtggacttgatattcctgctgtggattggattgtgcagtatgatcctcctgatgaaccc
aaggaatatattcacagggttggtcgaactgcccgtggagaaggtgcaaaaggaaatgcg
cttcttttcctgatcccagaggaactgcagtttctacgctatttaaaggctgccaaagtt
ccagttaaggaatacgagtttgatgagaaaaagctggcgaatgtgcagtctcatctggaa
aaattggtggcaagcaactattatctaaacaagtcggctaaggatgcgtatcgatcctac
attttagcatacaattcacactctatgaaagatatcttcaacgtgcaccgccttgatctg
caggctgttgctggatccttctgtttttcatgccctccaaaggttaatctgaacatagac
agtaatgcatccaaatttcgaaagaaaatgcgtaaagttgaaggtggagcacggaacaat
ttcagtgaaagcaatccttacgggaggcagagaagtgaagacgataatcggcaatttgta
aggtattag
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